| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0578 |
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| Symbol | |
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| ID | 4092196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 627028 |
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| End bp | 627951 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638013843 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_620462 |
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| Protein GI | 107022135 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.522993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCG CTTTCTACAC GCACCCCGAC TGCATGCTGC ACGAGATGGG GGAATGGCAT
CCGGAATGCC CGGCCCGCTT GTCGGCGATC CAGGATCAAC TGATTGCGAG CCGCATCGAC
GACCTGATCG TGCACGAAAC CGCGCCATTC GCGAGCGAGG TCGCGCTGGG TCGCGTGCAT
ACGCAGGCGC ACATCGACTA CATCCGGAGC ATGACGCCGG TCGACGGTCA CGTCGAGATC
GATCCCGATA CGCTGATGAA TCGCGACACG TGGCGCGCGG CGCTGCGCGC GGCCGGCGCC
GCGATCGCGG CGACCGACGC GGTGATCGAA GGCCGCTATG CGAATGCGTT CTGCGGCGTC
CGTCCACCCG GTCACCATGC GGAACCCGCG CGCGCGATGG GCTTCTGCTT CTTCAACAAC
GTCGCGATCG CCGCGCGGCA TGCACTCGAC GTACACGGCA TCGAGCGTGT CGCGATCATC
GATTTCGACG TGCACCACGG CAACGGCACC GAGGCGGCGT TCGCGAACGA CGAGCGCGTG
CTGATGTGCA GCTTCTTCCA GCATCCGCTG TATCCGTTCT CGGGCGTCGA TCATCAGGCG
CCGAACATGG TCAACCTGCC GATGCCCGCG CGCAGCAACG GGATGGCGAT CCGCGAAGCC
GTCGACATGT TCTGGCTGCC GCGCCTCGAT GCGTTCAAGC CGCAGATGCT GTTCGTGTCG
GCCGGGTTCG ATGCGCATCG CGAGGACGAC ATCGGCAATC TCGGCCTCGT CGAGGCCGAC
TTCGAATGGC TGACCGCCCA GATCGTCGAC GTCGCGCGCC GGCATGCGCA GGGCCGCATC
GTCAGCTGCC TCGAGGGCGG CTACAACCTG TCCGCGCTCG GGCGCAGCGT CGTCGCGCAC
CTGCGCGTGC TGGCCGGGAT CTGA
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| Protein sequence | MATAFYTHPD CMLHEMGEWH PECPARLSAI QDQLIASRID DLIVHETAPF ASEVALGRVH
TQAHIDYIRS MTPVDGHVEI DPDTLMNRDT WRAALRAAGA AIAATDAVIE GRYANAFCGV
RPPGHHAEPA RAMGFCFFNN VAIAARHALD VHGIERVAII DFDVHHGNGT EAAFANDERV
LMCSFFQHPL YPFSGVDHQA PNMVNLPMPA RSNGMAIREA VDMFWLPRLD AFKPQMLFVS
AGFDAHREDD IGNLGLVEAD FEWLTAQIVD VARRHAQGRI VSCLEGGYNL SALGRSVVAH
LRVLAGI
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