Gene Bcen_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0564 
Symbol 
ID4093795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp612369 
End bp613457 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content68% 
IMG OID638013829 
Productchorismate mutase 
Protein accessionYP_620448 
Protein GI107022121 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGACG AACTGAATTC CCGCCTGAAA CCGCTGCGCG ACCGCATCGA CGCGATCGAC 
GCGCAGCTGA TCGCGCTCCT GAACCAGCGC GCCGCGGTGG CGCTCGAGGT GGGCGAGGTC
AAGAAGCATT TCAACGCGCC GGTGTTCCGG CCGGAGCGCG AGCTGCAGGT GATCGCGCGG
CTGCAGGACA TGAGCGGCGG GCCGCTCGCG AGTGAGCACA TCAGCGCCAT CTGGCGCGAG
ATCATGGCCG CGAGCCGCGC GCTCGAGCAG ACGATCCACG TCGCGTTCCT CGGGCCGGTC
GGCACGTATA GCGAACAGGC GATGTTCGAG TATTTCGGCC AGTCGATCGA AGGGCTGCCC
TGCCCGTCGA TCGATGAGGT GTTCCGCTCG GTCGAGGCCG GTGCGTCGGC ATTCGGCATC
GCACCGGTCG AGAATTCGAC CGAAGGCGCC GTGTCGCGCA CGCTCGACCT GCTGCTGCAG
ACCCAACTGC TGATCAGCGG CGAGCTCGCG CTGCCCATCC ATCACAACCT GCTCACGCAG
AGCGGCACGC TCGACGGTGT GAAGCGTGTC TGCGCGCATG CGCATGCGCA GGCGCTTGCG
CAATGCCAGC AGTGGCTCGC GGCGAATGCG CCGCAGCTCG AGCGGCAGGC CGTGGCGAGC
AACGCGGAGG CCGCGCGCCT CGCAGCGGCC GATCCGACCG TCGCCGCGAT CGCGGGCGAT
CGCGCGGCCG CGCATTACGG CCTGCAGATC GCGTTCTCGC TGATCCAGGA CGATCCGCAC
AACCGTACGC GCTTCGTGAT CGTCGGCAAG CAGCCGGCCG GCCAGAGCGG TCACGACCAG
ACGTCGCTGA TCGTGTCGGT GAAGAACGAG CCGGGCGCCG TGTTCAAGCT GCTCGAGCCG
CTCGCGCGGC ACGGCGTGTC GATGACGCGC TTCGAGTCGC GTCCGGCGCG CGTCGGCACG
TGGGAGTACT ACTTCTACAT CGACATCGAA GGGCACCGCG ACGATGCGGC GGTGGCGGCC
GCGCTGGCGG AACTCGGCCA GAAGGCCGCG TTCCTGAAGG TACTCGGTTC GTATCCGCGC
GCACGCTGA
 
Protein sequence
MDDELNSRLK PLRDRIDAID AQLIALLNQR AAVALEVGEV KKHFNAPVFR PERELQVIAR 
LQDMSGGPLA SEHISAIWRE IMAASRALEQ TIHVAFLGPV GTYSEQAMFE YFGQSIEGLP
CPSIDEVFRS VEAGASAFGI APVENSTEGA VSRTLDLLLQ TQLLISGELA LPIHHNLLTQ
SGTLDGVKRV CAHAHAQALA QCQQWLAANA PQLERQAVAS NAEAARLAAA DPTVAAIAGD
RAAAHYGLQI AFSLIQDDPH NRTRFVIVGK QPAGQSGHDQ TSLIVSVKNE PGAVFKLLEP
LARHGVSMTR FESRPARVGT WEYYFYIDIE GHRDDAAVAA ALAELGQKAA FLKVLGSYPR
AR