Gene Bcen_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0553 
Symbol 
ID4091771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp599970 
End bp601547 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content71% 
IMG OID638013818 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_620437 
Protein GI107022110 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCC GCATCTACGT TCCGCGCGAT TCGTCCGCGC TGGCGCTCGG CGCCGACGCG 
CTCGCCGCCG CGATCGTGGC CGAAGCCGAA CGGCGCGGCG TCACGGTCGA ACTGATCCGC
AACGGTTCGC GCGGGCTGCT GTGGCTCGAG CCGCTCGTCG AGGTCGGGAC GGCCGCGGGC
CGCGTCGGCT ATGCGAACCT GTCGGCCGCC GACGTGCCGG CCCTGTTCGA CGCCGGCTGG
CTCGAAGGCG GCACGCATCC GAGCGGCGTC GGCCTCGTCG ACGCGCTGCC CTACCTCGCC
CGTCAGCAGC GGCTCACGTT CGCGCGGATC GGCCTGACCG ATCCGCTGTC GATCGACGAC
TATCTGCAAC ACGGCGGCCT CGCCGGCCTG AAGAACGCAC TGGCGCTCGA TGGCGACGCC
GCCTGCGAAA CGCTGATCGA ATCGGGGCTG CGCGGCCGCG GCGGCGCGGC GTTCCCGGCC
GGCATCAAGT GGCGTACCGT GCGGCAAGCA CGCGCCGCGC AGAAATACAT CGTCTGCAAC
GCGGACGAAG GCGATTCGGG CACGTTCTCC GATCGCCTGC TGATGGAATG CGATCCGTAC
TGCCTGATCG AAGGGATGAT CATCGCGGGC GTCGCCACCG GCGCGACGGT CGGCTACATC
TATGTGCGCA GCGAATACCC GCACGCGATC GCGACGCTCG AAGCCGCGAT CGTCCGCGCG
CGTGAAGCCG GCTGGCTCGG CGAGCACGTG CTCGGCTCCG CGCATGCGTT CGAGCTGCAC
GTCGCGAAAG GCGCGGGCTC GTACGTATGC GGCGAGGAAA CGGCGCTGCT CGAATCGCTC
GAGGGCAAGC GCGGCGTCGT GCGCGCGAAG CCGCCGCTGC CCGCGCTCGC GGGCCTGTTC
GGCCAGCCGA CCGTGATCAA CAACGTGATC ACGCTCGCGA CGGCGCCCGT GATCTTCGCG
CGCGGCGCCG CGTTCTATCG CGACTACGGG ATGGGCCGCT CGCGCGGCAC GCTGCCGTTC
CAGCTCGCGG GCAACATCCG CTACGGCGGC CTCGTCGAGC TCGCGTTCGG CGTCACGCTG
CGCGAACTGC TGTTCGACTT CGGCGGCGGC ACGGCCAGCG GCCGGCCGGC ACGCGCCGCG
CAGGTCGGCG GCCCGCTCGG CACCTACCTG CCCGACCACC AGTGGGACGT GCCGCTCGAC
TACGAGGCGT ACACGGCGAT CGGCGCGGTC GTCGGCCACG GCGGCATCGT GCTGCACGAC
GACACGTCGA ATCTCGCCGA GCTGGCCGAA TACGCGATGA AGTTCTGCGC GATCGAATCG
TGCGGCAAGT GCACGCCGTG CCGGATCGGT TCGACGCGCG GCGTCGAGAC GATCGCGCGG
ATTCGCCACG GTGATACGTC GGAGCGGCAG GTCACGCTGT TGCGCGACCT GTGCGACACC
ATGCTCGCCG GCTCGCTGTG CGCGATGGGC GGCATGACGC CGTACCCGGT GCTGTCCGCA
CTCGACCATT TCCCCGAAGA TTTCGGGCTC GCCGCCGGCA AGGATGCCGC GTCGGACCCG
GTCAAGGCTG CGGCCTGA
 
Protein sequence
MTTRIYVPRD SSALALGADA LAAAIVAEAE RRGVTVELIR NGSRGLLWLE PLVEVGTAAG 
RVGYANLSAA DVPALFDAGW LEGGTHPSGV GLVDALPYLA RQQRLTFARI GLTDPLSIDD
YLQHGGLAGL KNALALDGDA ACETLIESGL RGRGGAAFPA GIKWRTVRQA RAAQKYIVCN
ADEGDSGTFS DRLLMECDPY CLIEGMIIAG VATGATVGYI YVRSEYPHAI ATLEAAIVRA
REAGWLGEHV LGSAHAFELH VAKGAGSYVC GEETALLESL EGKRGVVRAK PPLPALAGLF
GQPTVINNVI TLATAPVIFA RGAAFYRDYG MGRSRGTLPF QLAGNIRYGG LVELAFGVTL
RELLFDFGGG TASGRPARAA QVGGPLGTYL PDHQWDVPLD YEAYTAIGAV VGHGGIVLHD
DTSNLAELAE YAMKFCAIES CGKCTPCRIG STRGVETIAR IRHGDTSERQ VTLLRDLCDT
MLAGSLCAMG GMTPYPVLSA LDHFPEDFGL AAGKDAASDP VKAAA