Gene Bcen_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0544 
Symbol 
ID4091762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp587366 
End bp588046 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content70% 
IMG OID638013809 
ProductGntR family transcriptional regulator 
Protein accessionYP_620428 
Protein GI107022101 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.314121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCC TGACCGACGT CACCCGCGAC CGCCCCGCCG CGTCGTCAGC CAGCCTCGCC 
GACCGCGCGT ACGCGCTGAT CCAGCGGGAC ATCATCACGA TGCGCCTGAA GCCGGGCGCC
GCGCTCAACG AAGCCGACCT CGTTGCACGC ACCGGAATCG GCCGCACGCC GGTGCACCAG
GCCGTGCATC GGCTCGTGCT CGAAGGGCTG CTGTCCGTGA TACCGCGCAA GGGCTTGATG
GTGCAGCCGC TCTCGCTCGA CGACATCGTC GCGGTGATCG ACGTGCGGCG CATCAACGAA
GCGCACTGCG CCGAACTCGC CGCGCGTCAT GCGACGCCCG ACGATCTCGC GCGCCTGGCC
GCGCTGCTCG ACGATGGGCA GGCCTGCGTC GACACGCACG ACGTCGAGGG CATGATGGAG
CTCGACCGCG CGTTTCATCA GACGATCGCC GCGGCCGCGC GCAATGCGGT GCTCGCCGAC
ATCCTGCGCG CGCTGCACGA GCGCTCGCTG CGCTTCTGGT TCGTCACGCT GTCCGAACCG
CACCATCTCG CCGACGTCCA GCACGAGCAT CGCGCGCTGT TCGACCGGCT GTCCGCACGC
GACGCCGCCG GCGCGCGCGC GGCCGTCGTA GGCCATATCG ATTCGTTCCG CTCCACGCTT
CTTCAACATC TTCGCCCCTG A
 
Protein sequence
MSTLTDVTRD RPAASSASLA DRAYALIQRD IITMRLKPGA ALNEADLVAR TGIGRTPVHQ 
AVHRLVLEGL LSVIPRKGLM VQPLSLDDIV AVIDVRRINE AHCAELAARH ATPDDLARLA
ALLDDGQACV DTHDVEGMME LDRAFHQTIA AAARNAVLAD ILRALHERSL RFWFVTLSEP
HHLADVQHEH RALFDRLSAR DAAGARAAVV GHIDSFRSTL LQHLRP