Gene Bcen_0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0489 
Symbol 
ID4092638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp531176 
End bp532423 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content66% 
IMG OID638013749 
Productextracellular solute-binding protein 
Protein accessionYP_620374 
Protein GI107022047 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0816838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTC GCTCGATCAT GGGCGCGCTC TGCGCCGCGG GTCTGATGGC TGGCGCCGTG 
GCGGCGCAGG CAGCCGAGAA CGTAACCGTG CTGCACTGGT GGACCTCGGG CGGCGAGTCG
AAGGCCGTCG GCGTGCTGAA GGACGACCTG CAGAAGCAGG GCTACGTGTG GAAGGACTTC
GCGGTCGCGG GCGGCGCCGG CGCCGCGGCG ATGACCGCGC TGAAGACCAA GGTGATCAGC
GGCGATTCCC CGTCGGCCGC GCAGATCAAG GGCCCGCTGA TCCAGGACTG GGCCGACCAG
GGCGTGCTCG TCAACATCGA TTCGGCCGCC GGCGACTGGA AGCAGAACCT GCCGCCGGAA
ATCGACAAGA TCATCAAGTA CAAGGGCCAT ACCGTCGCCG CGCCGTTCTC GGTGCACCGC
GTCAACTGGC TGTACATCAA CAAGGCCGCG CTCGACAAGG TCGGCGCGAA GGTGCCGACC
ACCTGGCCCG AATTCTTCGC GGTGGCCGAC AAGCTGAAGG CCGCGGGCAT CCAGCCGGTC
GCGATGGGCG GCCAGCCGTG GCAGGACCTG ACGCTGTGGG AAGACGTCGT GCTGTCGCAG
GGCCCGGCGT TCTACAAGAA GGCGCTGGTC GACCTCGACC AGGCGACGCT GACGTCGCCG
CAGATGCTGT CGGTGTTCGA CACGGTGCGC AAGATCCAGG GCTACTTCGA CACCGGCCGT
AACGGCCGCG ACTGGAACCT CGCGACCGCG ATGGTCATCA ACGGCAAGGC CGGCATGCAG
TTCATGGGCG ACTGGGCGAA GGGCGAATTC GAAAACGCCG GCAAGAAGGC GGGCAAGGAC
TACATCTGCG CGCCGGTGCC GGGCACCGCG AATTCGTACA CGTTCAACGT CGATTCGTTC
GTGTTCTTCC AGCAGAAGGG CGAGAAGAAC GCGACGCCGG GCCAGCTCGC GCTCGCGAAG
ACGATCATGA CGCCCGAGTT CCAGGAGCAG TTCAGCCTGC TGAAGGGCTC GGTGCCGGTG
CGTCTCGGCG TGAAGATGGA CAAGTTCGAC GACTGCGCGA AGAAGTCGTA TGCCGACGAG
CAGACCGCGA TCAAGTCGGG CGGCTTCGTG CCGTCGCTCG CGCACGGCAT GGCGCAAGGC
GACGCGACTG CCGGCGCGAT CACCGACGTC GTGACGAAGT TCATGAACTC GCAGCAGGAT
TCGAAGAGCG CGGTCGCCGC GCTCGCGAAG GCCGCGAAGG TCAAGTAA
 
Protein sequence
MKVRSIMGAL CAAGLMAGAV AAQAAENVTV LHWWTSGGES KAVGVLKDDL QKQGYVWKDF 
AVAGGAGAAA MTALKTKVIS GDSPSAAQIK GPLIQDWADQ GVLVNIDSAA GDWKQNLPPE
IDKIIKYKGH TVAAPFSVHR VNWLYINKAA LDKVGAKVPT TWPEFFAVAD KLKAAGIQPV
AMGGQPWQDL TLWEDVVLSQ GPAFYKKALV DLDQATLTSP QMLSVFDTVR KIQGYFDTGR
NGRDWNLATA MVINGKAGMQ FMGDWAKGEF ENAGKKAGKD YICAPVPGTA NSYTFNVDSF
VFFQQKGEKN ATPGQLALAK TIMTPEFQEQ FSLLKGSVPV RLGVKMDKFD DCAKKSYADE
QTAIKSGGFV PSLAHGMAQG DATAGAITDV VTKFMNSQQD SKSAVAALAK AAKVK