Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0481 |
Symbol | |
ID | 4092630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 521466 |
End bp | 522587 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638013741 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_620366 |
Protein GI | 107022039 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTCGG ATACCGATTT CGCCCACATG CAGCGCGCGC TCGCGCTCGC GGCGCGCGGC ATGTACACGA CCGCGCCGAA TCCGCGCGTC GGCTGCGTGA TCGTCAAGGA CGGCGACGTG ATCGGCGAAG GCTTCACGCA GCCGGCCGGC CAGGACCACG CGGAAGTGCA GGCGCTCAAG GACGCGCGTT CGCGCGGCTA CGACGTCGCG GGCTCCACCG TCTACGTGAC GCTCGAACCG TGCAGCCATT TCGGCCGCAC GCCGCCGTGC GCGAACGCGC TGATCGACGC GCGCGTCGCG AAGGTCGTCG CCGCGATGGA AGACCCGAAC CCGCAGGTGT CGGGGCGCGG CCTCGGAATG CTGCGCGACG CGGGTATCGA CGTGCGCTGC GGGCTGCTCG CGCATGAAGC CGGCGAGCTG AACATCGGCT TCGTGTCGCG GATGACGCGC GGCCGCCCGT GGGTGCGGAT GAAAACCGCC GCGTCGCTCG ACGGCCGCAC CGCGCTGCCG TCCGGCGAAA GCCAGTGGAT CACCGGCGAG GCCGCGCGCC TCGACGGCCA TGCGTGGCGC GCCCGTGCGT GCGCGATCCT CACCGGTATC GGCACCGTGC GCGAGGACAA TCCGCTGCTG ACCGTGCGCG GCATCGACAC GCCGCGCCAG CCGCAACGCA TCCTGGTGGA CAGCCGCCTC GACCTGCCGC TCGACGCGCG GCTGCTCGAA GGCGCGCCAT TGCTGATCTT CTGCGGCCGG CTCGACGCCG CCGGCGAACT GCGCGCGAAC GTGCTGAAGT CGCGCGGCGC GGAAATCGTG CCGCTCGCGA ATGCGCACGG CAAGGTCGAC CTGCCCGCGA TGCTGGCGGC GCTCGGCGCG CGCGGCGTCA ACGAGCTGCA CGTCGAGGCC GGCCACAAGC TGAACGGTTC GCTGCTGCGC GAACGCTGCG TCGACGAATT GCTGGTGTAT CTGGCGCCGA GCCTGCTGGG CGCCGACGCG GCCGGCATGT TCGATCTCGC CGCGCCGGCC AGCCTCGAGG CGCGCACCCG GCTGTCGTTC CACGGTATCG AGCGGGTCGG CGACGACCTG CGCATCCTCG CGCGCGTCGC ACCGACCGAC ACGTCTCACT GA
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Protein sequence | MFSDTDFAHM QRALALAARG MYTTAPNPRV GCVIVKDGDV IGEGFTQPAG QDHAEVQALK DARSRGYDVA GSTVYVTLEP CSHFGRTPPC ANALIDARVA KVVAAMEDPN PQVSGRGLGM LRDAGIDVRC GLLAHEAGEL NIGFVSRMTR GRPWVRMKTA ASLDGRTALP SGESQWITGE AARLDGHAWR ARACAILTGI GTVREDNPLL TVRGIDTPRQ PQRILVDSRL DLPLDARLLE GAPLLIFCGR LDAAGELRAN VLKSRGAEIV PLANAHGKVD LPAMLAALGA RGVNELHVEA GHKLNGSLLR ERCVDELLVY LAPSLLGADA AGMFDLAAPA SLEARTRLSF HGIERVGDDL RILARVAPTD TSH
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