Gene Bcen_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0462 
Symbol 
ID4092765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp504427 
End bp505182 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content71% 
IMG OID638013722 
ProductDeoR family transcriptional regulator 
Protein accessionYP_620347 
Protein GI107022020 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACGA CACAACGCAA GAAGGCGATC CTCGATGCGC TCGCGCGCGA CGGCCAGGTA 
CTGGCCGCCG AGCTGAGCGT GCAATTCGGC GTGTCCGAAG ACACGGTGCG CCGCGACCTG
CGCGAGCTCG CGGCCGAAGG GCTGCTGCAG CGCGTGCATG GCGGCGCGCT GCCGGCGTCG
CCGGCCATCG CGCCGTTCGC GCAGCGCGAA GCGCTCGAAT CCGCGGAGAA GCGGCGCATC
GCGCGGCGGG CCGCGCAGAT GATCGCGCCC GGGCAGGTGG CGATCGTCGA CGGCGGCACG
ACCTCCGCGC TGCTCGTCGG CCAGTTGCCG GCCGACCTGC GCGCGACGAT CGTCACGCAC
AGCCCGAGCG TCGCGGTCGC GCTGGCCGCC CATCCGTCGA TCGACGTGAT CCTGATCGGC
GGGCGGCTCT ACAAGCATTC GATCGTCGCG GTCGGCGCCG CGGCGATGGA AGGCATCGCG
CGCATTCATG CAGACCTGTA CTTCATGGGC GTCACGGGCG TCCATCCGGT AGCCGGCCTG
AGCACCGGCG ATTTCGAGGA AGCGGCGATC AAGCGCGCGC TGGCCGAACG CGCGGCCGAG
ACGGTCGTGC TCGCGTCGCA GTCGAAACTG CGCGCGGCAT CGCAATTCGT GATCGGTGAC
CTCACGCTGG CGCAGACGAT CGTCGTCGAG AAGGAAACCG ACGCCGCGCT GACGAAGCCG
ATCGAGGCCG CGGGCGTGAC GGTGGTGCGC GCGTAG
 
Protein sequence
MLTTQRKKAI LDALARDGQV LAAELSVQFG VSEDTVRRDL RELAAEGLLQ RVHGGALPAS 
PAIAPFAQRE ALESAEKRRI ARRAAQMIAP GQVAIVDGGT TSALLVGQLP ADLRATIVTH
SPSVAVALAA HPSIDVILIG GRLYKHSIVA VGAAAMEGIA RIHADLYFMG VTGVHPVAGL
STGDFEEAAI KRALAERAAE TVVLASQSKL RAASQFVIGD LTLAQTIVVE KETDAALTKP
IEAAGVTVVR A