Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0458 |
Symbol | |
ID | 4092761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 501009 |
End bp | 502298 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638013718 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_620343 |
Protein GI | 107022016 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAAA TGCCGCAGTC GTTCGGAAAC AAGACGAGAC ATACCCATCA ATATCAGGAG TCCGGAATGC AGGCATTAAC GGGAATCAAG GTCGTCGATC TGAGTCGCGC GCTGTCGGGG CCGTTCTGCT CGATGGTGCT CGCGGATCTC GGCGCCGACG TGATCAAGGT CGAATCGGGG CCGCACGGCG ACATGAGCCG CGCGTGGGGG CCGTTCGATC GCGGCGTGAG CACGTACTAC CTGTCCTGCA ACCGCAACAA GCGCGGCATC TGCGTGGACT TCCGGCAGCC GGCCGGCCTC GACGTCGTGC GGCGCCTGAT CGCGCAGGCC GACGTCGTGA TCGAGAATTT CAAGGCGGGC ACGATGGACG CGATGGGGCT CGGCTATGCT GAGCTGAGCG CGGGCGATCC GCGGCTCGTG ATGGGCAGCG TCACCGCGTT CGGCTCGCGC GGCCCGCTGC GCGACTGGCC GGGCTTCGAC CAGATCGCGC AGGGCTATGC GGGGCTGATG AGCCTCACCG GTTTCCCGGA TGGCGAGCCG ACCCGCACGG GCACCGCGAT CGGCGATCTC AGCTCGGGGA TGTGGGTCGC GACCGGCGTG ATGGCCGCGC TGTTCGAGCG CGAGCGCACC GGGCGCGGCC AGCATGTCGG CACGTCGCTG CTCGAAAGCC TCGTTGCGCT GCTGAGCGTG CATGGGCAAC GCTACCTGAG CCTCGGCGAC GTGCCACGCC GTACCGGCAA TGCGCATGCG GTGATCGCGC CGTACGGCGT GTTCGAGACG GCCGACGGCC CGCTCAACCT CGCGCCGATC ACGACCGACA TGTGGCTGCG GCTGTGCCAG TTGCTGGATC TGCCCGCGCT GCCCAACGAT CCGCGCTTCG CGACCAACGA TGCGCGCGTC GCGCATCGCG ATGAACTCAA GGCGCTGCTC GAAAGCCGGT TGCGCACGCG CGGCAAGCGC GAATGGACGC AACGGTTCGT CGAGGCCGGG CTGCCGGCCG GCCCGATCCA TACGCTCGAC GAAGTGTTCG ACGATCCGCA GCTCGCGCAT TGCGGGCTGG TCGAGCCGGT CGCGCATCCG ACGCTCGGTA CGCTGCGCCA GGTCGTCACG CCGCTCGGCG GGATGGACGA CGACGTGCCG GCGCCGCGCA CCCGCCATGC GCCGCCGCTG CTCGGCGAGC ATACGGTCGA TGTGCTGCGC GAAGCCGGCT ACGGCGACGA CGCGATCGAC GCACTGCTGG CCGGGCGCGC GATCTTCCAG GCCGATGCGG TGGCGGAGGC CGTGCAATGA
|
Protein sequence | MSEMPQSFGN KTRHTHQYQE SGMQALTGIK VVDLSRALSG PFCSMVLADL GADVIKVESG PHGDMSRAWG PFDRGVSTYY LSCNRNKRGI CVDFRQPAGL DVVRRLIAQA DVVIENFKAG TMDAMGLGYA ELSAGDPRLV MGSVTAFGSR GPLRDWPGFD QIAQGYAGLM SLTGFPDGEP TRTGTAIGDL SSGMWVATGV MAALFERERT GRGQHVGTSL LESLVALLSV HGQRYLSLGD VPRRTGNAHA VIAPYGVFET ADGPLNLAPI TTDMWLRLCQ LLDLPALPND PRFATNDARV AHRDELKALL ESRLRTRGKR EWTQRFVEAG LPAGPIHTLD EVFDDPQLAH CGLVEPVAHP TLGTLRQVVT PLGGMDDDVP APRTRHAPPL LGEHTVDVLR EAGYGDDAID ALLAGRAIFQ ADAVAEAVQ
|
| |