Gene Bcen_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0429 
Symbol 
ID4090998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp472250 
End bp473437 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content68% 
IMG OID638013688 
Productinner-membrane translocator 
Protein accessionYP_620314 
Protein GI107021987 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID[TIGR03408] urea ABC transporter, permease protein UrtC 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTTCAT ACACCGATTC GATGTCGAAC CCGGTCGCCG ACGCGTCGAA GCCCGCTGCC 
GCCGCGCGCG CGGCGGACGG CTTCGCGCTC GGCCTGCCGC CCCGCCCCGC GCTGCTGTCG
CGCCGCGCGT GGCTCGCGCT CGTCGCGCTG TGCGTGGCGA TCGGCATCGG CGTGCCGCTC
GCCGCGCTGG TTGCGCCCGA AGCCAGCGCG TTCCATCTGT CCGCGTACAC GATGACGCTC
GCCGGCAAGC TGATGTGCTA CGCGATCGCC GCGCTCGCGC TCGATCTCGT GTGGGGCTAC
TGCGGCATCC TGAGCCTCGG CCACGGCCTG TTCTTCGCGC TCGGCGGCTA TGCGATCGGC
ATGTACCTGA TGCGCGAGAT CGGCCGCGAC GGCAAGTACG GCAGCGACCT GCCCGACTTC
ATGGTGTTTC TCGACTGGCA CCAGTTGCCG TGGTACTGGA GCGGCACGCA GCATCTCGCG
TGGGCCCTCG CGCTGGTCGT GCTCGTGCCG GCCGTGCTCG CGTGGGTGTT CGGCTTCTTC
ACGTTCCGCT CGCGCGTGAA GGGCGTGTAC CTGTCGATCA TCACGCAGGC CATGACGTTC
GCCGCGATGC TGCTGTTCTA TCGCAACGAG ACGGGCTTCG GCGGCAACAA CGGCTTCACC
GATTTCAAGC GCATCGCCGG CTTCGCGATC ACGTCGCCGG GCACGCGTAC GGTGCTGTTG
CTGCTGACGT TCGCGATCCT CGTGCTCGCG TTCATCGCCG CGCGCGCGAT CGTCACGAGC
AAGCTCGGGC GCGTGGTGAC CGCGGTGCGC GACGGCGAGA CGCGGCTGAT GTTCCTCGGC
TACAGCCCGC TCGCGTACAA GCTGTTCGTG TGGACCGTGT CGGCCGTGCT GTGCGGCATC
GCCGGCGCGC TGTACGTGCC GCAGGTCGGC ATCATCAATC CCGGCGAGAT GTCGCCCGGC
AACTCGATCG AAATGGCGAT CTGGGTCGCG GTGGGCGGGC GCGGCACGCT GATCGGGCCG
ATCGTCGGCG CGTTCGCGGT GAACGGCGCG AAGAGTTTCT TCACCGCGTA CTTCGCCGAA
TACTGGCTGT TCTTCCTCGG CCTGATCTTC GTGCTCGTGC CGCTCCTGCT GCCGCGCGGG
ATCATGGGCC TCGTCGAAAC CGTGCTCGCG AAGGGGAAAC GCGCATGA
 
Protein sequence
MTSYTDSMSN PVADASKPAA AARAADGFAL GLPPRPALLS RRAWLALVAL CVAIGIGVPL 
AALVAPEASA FHLSAYTMTL AGKLMCYAIA ALALDLVWGY CGILSLGHGL FFALGGYAIG
MYLMREIGRD GKYGSDLPDF MVFLDWHQLP WYWSGTQHLA WALALVVLVP AVLAWVFGFF
TFRSRVKGVY LSIITQAMTF AAMLLFYRNE TGFGGNNGFT DFKRIAGFAI TSPGTRTVLL
LLTFAILVLA FIAARAIVTS KLGRVVTAVR DGETRLMFLG YSPLAYKLFV WTVSAVLCGI
AGALYVPQVG IINPGEMSPG NSIEMAIWVA VGGRGTLIGP IVGAFAVNGA KSFFTAYFAE
YWLFFLGLIF VLVPLLLPRG IMGLVETVLA KGKRA