| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0413 |
|---|
| Symbol | |
|---|
| ID | 4091098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 456635 |
|---|
| End bp | 457891 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638013672 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_620298 |
|---|
| Protein GI | 107021971 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGC GCTTCGGCAA CCCGGACGTC GCGAAGGCCG TCGCGAACCT CGTCTGGCTG
GGGCTCGAAC GGCTCACGCA GATCGGCGTC GCGATCGCGA TCAGCGGCCT GCTGGCCCGT
TATTTCGGGC CAGATGTGTT CGGCAAATGG CAGTATGCGA ATACGCTTCT CCTGGTACTG
GCGCCGCTCA CCTGGGTGTG CGGCGCGGAA ATCCTCGTCC CCACCATCGT CCAGCGCCCG
CCCGCGCAGC TCGGCGCCGT GCTCGGCAGC GCGTTCGTGC TGCGCATCGC CGTATCGGTC
GCCGCGCTCG CCGCGACCTG GATCGCGATC GCCGCGGGCG CCTTCGATCC GCTGGTCGGC
GCGATGCTCG CCGGCCTGGC CGTCACGATG GTGTTCCGCG AGCCGTTCGT CGGCGTGATC
AACGCGTGGC TGCAGAGCAT GACCTACAGC AAGCCGCAGC TCGTCACCAG CATGCTCACC
GCGCTCGCCA AGGCGCTGCT CGTCTGGCTC CTGGTGCGCG CGGCCGCCGG CCCCGCCCGT
TTCGCGTGGC TGTGGGCGCT GGAAGCCGCC GCGATCGGCC TCGCGCTGCT GCTGTACTAC
CGCCATCGTA ACGGCGGCGC GCTCGGCTGG ACGTTCGACA AGCCGCTGTT CCGGCACTTT
GCCACGGCCG GCACCGTGTT CTGGCTCGGC CTCATCTGCA TGTACCTGTT CCTGAAGCTC
GACCGCCTGA TGCTCGAGCG TCACGTTTCG TTCGCCGATC TCGGCCGCTA CTCGGCCGCG
CAGCAACTCA ACGAGAACTG GATCACGCTC GCGCTGATGC TCGCGCAGAC CATCGCGCCC
GCGTTCGTCT ACCGCGTGCA GGACGTCGCG CGGCTGCGCC GCAACATCGT CCGGCTGATC
GCGATGACGG CCGGCCTGAT GACGGCCGGC GCGCTCGTGC TCGACGCCGC CGCCCCGCTG
ATCGTAGGCA AGGTATTCGG CCGCGGCTAC GAGGCGTCCG TCGACATCTT CCGCTGGGCC
GTCTGGCTGT CCGTGCCGGC CGGCATCGAG GCGATAGGCA ATCTTATCGT TCTCAAATAT
CAAGCAAAAT TCGTGTTGCT GACGAAATGG CTGCTCGCGC TGGCCATCGC CGCACTCGTC
AACCTGTTCG CGATCCCGCG GCTCGGCCTG TACGGCGCGC TCGTCGGGCT GGCGGCCGGC
TACCTCGCCG CCGCCGCCGT CAACTTTTAT TACATCCGTT TCAAGCTGCG AACATGA
|
|---|
| Protein sequence | MLKRFGNPDV AKAVANLVWL GLERLTQIGV AIAISGLLAR YFGPDVFGKW QYANTLLLVL
APLTWVCGAE ILVPTIVQRP PAQLGAVLGS AFVLRIAVSV AALAATWIAI AAGAFDPLVG
AMLAGLAVTM VFREPFVGVI NAWLQSMTYS KPQLVTSMLT ALAKALLVWL LVRAAAGPAR
FAWLWALEAA AIGLALLLYY RHRNGGALGW TFDKPLFRHF ATAGTVFWLG LICMYLFLKL
DRLMLERHVS FADLGRYSAA QQLNENWITL ALMLAQTIAP AFVYRVQDVA RLRRNIVRLI
AMTAGLMTAG ALVLDAAAPL IVGKVFGRGY EASVDIFRWA VWLSVPAGIE AIGNLIVLKY
QAKFVLLTKW LLALAIAALV NLFAIPRLGL YGALVGLAAG YLAAAAVNFY YIRFKLRT
|
|---|
| |