| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0401 |
|---|
| Symbol | |
|---|
| ID | 4091086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 440763 |
|---|
| End bp | 441653 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638013660 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_620286 |
|---|
| Protein GI | 107021959 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG TTTTCGTCAC GGGCCTGGAC GGATTTACCG GCCGCTATAT GGCGGAGGAG
TTGATCCGCT CGGGGCACGA AGTTTGCGGG ATCGTTCACA AGCCGGTTGC CGCTGCGCCG
TGGCGAACGC ACGTGTGCGA TCTGCTTGAT ACCGACGCGC TGGTTCGCGT GCTGTCCGAC
GAAAAGCCGG ATGCCGTCGT GCATCTGGCG GCCATTGCGT TCGTTCAGCA CGGCGATGTC
GGCGCGATCT ATCAGACCAA CGTGGTCGGG ACGCGCAATC TGCTTGATGC GCTGACGCGC
GCCGCGTGTC AGCCGCGGGC CGTGTTGTTG GCAAGCAGTG CGAACGTCTA TGGCAATTCC
GACCGCGAAA TCATCGACGA ATCCACTGCG CCGGCGCCCG CAAACGATTA CGCAATCAGC
AAGCTGGCGA TGGAAATGGT CGCGCGCATG TGGCAGGACA AACTTCCGAT CGTCATCGTG
CGGCCGTTCA ATTACACGGG CGTCGGTCAG GACGAGCGAT TCCTGCTGCC CAAGATCGTT
CGGCATTTTA GCGCGCGCGC GGAGCGCATC GAGTTGGGCA ATCTGAATGT CGTGCGAGAT
TTCTCGGATG TGCGCATGGT GGTCGCCGCG TATCGGAAGT TGATCGAAGC CGACTTCGCA
GGACGCACGT TCAACGTCTG CTCAGGTATC GGGTATTCGC TGCAGGACGT CTTGGCGACG
GTGCAGGAAC TATCCGGGCA TGAACTCGAG GTGGCGGTGA ATCCGCAGTT CGTGCGCGCG
AACGAGGTCC ACAAGCTCGT CGGAAATTGC CGGGCGCTTG AACACGCGAT CGGTTCGACT
CACGCGATAC CGCTTCGCAA TACGCTTGCA TGGATGCTCG AACGTCCATG A
|
|---|
| Protein sequence | MAKVFVTGLD GFTGRYMAEE LIRSGHEVCG IVHKPVAAAP WRTHVCDLLD TDALVRVLSD
EKPDAVVHLA AIAFVQHGDV GAIYQTNVVG TRNLLDALTR AACQPRAVLL ASSANVYGNS
DREIIDESTA PAPANDYAIS KLAMEMVARM WQDKLPIVIV RPFNYTGVGQ DERFLLPKIV
RHFSARAERI ELGNLNVVRD FSDVRMVVAA YRKLIEADFA GRTFNVCSGI GYSLQDVLAT
VQELSGHELE VAVNPQFVRA NEVHKLVGNC RALEHAIGST HAIPLRNTLA WMLERP
|
|---|
| |