Gene Bcen_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0395 
Symbol 
ID4091753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp434037 
End bp434789 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID638013654 
ProductABC transporter related 
Protein accessionYP_620280 
Protein GI107021953 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACACA TTGAACTGAA GAACGTGACG CTGGATTTGC CGATCTACGA CGTCCAGGGC 
CGCTCGCTGA AGAAACAGGT GCTTCGCATG GGGCGACGCA ACCGGATCGC GGAGGGTAAC
GACGGCGTCA TCGTCGTACG GGCGCTCGAC GATCTGAGTT TCCGCTTCGA TCGAGGCGAT
CGCGTGGGGC TCATTGGTCA CAACGGCGCG GGAAAGTCGA CGCTGCTGCG CGCGATGGCC
GGCATTTATC CTCCGACAGC CGGCTCGCTG TCACGAGTGG GCAAGGCCGT GCCGCTGCTC
GACATCAGCC TCGGCATGGA CGAGAACTCG ACCGGTATGC AGAACATCCG GTTGCGCGGC
CTGCTGCTCG GCATGACTGA CGCGGAGATT CGCAAAAAGC AGAACGATAT CGCTGAGTTC
AGCGAATTGG GCGACTACCT CGATCTGCCG ATCCGTACCT ATTCGAGCGG CATGAAGATG
CGGCTTGCAT TCGCCGTTTC CACGGCGGTC GACGCCGAGA TCCTGCTGCT CGATGAAGTG
ATGGGCGTGG GCGATGCGTC GTTCATGCAC AAGGCCGAGG CGCGTCTCGA GGAACTGCAC
GACCGCGCCG AGATCGTTGT GCTCGCGATG CACTCGAACA AGGAGATCCG CAAGGTGTGC
AACAAGGCGC TGTGGATGGA GCGCGGGCGT GTGCGCGCTT TCGGGGAAGT CGACGACGTC
GTGTCGCAAT ATGCTGCTTC GGTGGGGGAG TGA
 
Protein sequence
MAHIELKNVT LDLPIYDVQG RSLKKQVLRM GRRNRIAEGN DGVIVVRALD DLSFRFDRGD 
RVGLIGHNGA GKSTLLRAMA GIYPPTAGSL SRVGKAVPLL DISLGMDENS TGMQNIRLRG
LLLGMTDAEI RKKQNDIAEF SELGDYLDLP IRTYSSGMKM RLAFAVSTAV DAEILLLDEV
MGVGDASFMH KAEARLEELH DRAEIVVLAM HSNKEIRKVC NKALWMERGR VRAFGEVDDV
VSQYAASVGE