Gene Bcen_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0394 
Symbol 
ID4091752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp433244 
End bp434026 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content56% 
IMG OID638013653 
ProductABC-2 type transporter 
Protein accessionYP_620279 
Protein GI107021952 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACTC TTTCACTTGC TGATCTCAAA CAGAGCATTG CCTCGTGGCG GTTATGGACG 
CTGCTCGGCT GGCTCGAAAT CCGGCAGCGC TATGCTCGCT CGAGTGTCGG ACCGTTCTGG
CTCACGATCA GCATGGGCGT GATGATTACG TCGCTCGGCG TGGTCTACGG TACGTTGTTC
GGACAAAAGA TGAACGAATA TCTGCCGTTC CTCGCATCGA GCATCGTGCT GTGGGGGCTT
TTTTCGCAGA CGATCCAGGA GGGAAGCATC GCGTATATCA GCAGCGGTGC CTACATACGC
CAGGTGCCCA CACCGAAGCT GATCTACATT CTGCAAGTCG TATGGCGGAA CCTGATCGTG
CTGGCACACA ACTTCGTGAT TGTCATCGGT CTTCTGATGA TCTTCGGCGT CAAAAGCTGG
GAGACGCTGC CGATGTTCAT TCCGGGGCTG CTTCTGTATG TGCTGAATGC AATGTGGATC
GCCATGCTGA CAAGCCTGTT GTCCGCACGA TTCCGCGACC TTCCGCAGAT CATTGGCGCG
CTGCTTCAAG TCGCATTCTA TGTAACACCC ATCATCTTCC GTCCAGACGC GCTGAATCGC
TTTTCGTTCA TCGTCGAATG GAATCCGCTT GCTTACCTGA TCGATGTCGT TCGCGGCCCG
CTGATCGGAC AAATGCCGAG CGCGCTGACG TGGGGAGTCA CCATCGGCAT GGCGGTCATT
GGATGGCCGA TCGCACTGCT CATGACCGGT CGTTATCTGA AACGTCTTCC GTACTGGGTC
TGA
 
Protein sequence
MLTLSLADLK QSIASWRLWT LLGWLEIRQR YARSSVGPFW LTISMGVMIT SLGVVYGTLF 
GQKMNEYLPF LASSIVLWGL FSQTIQEGSI AYISSGAYIR QVPTPKLIYI LQVVWRNLIV
LAHNFVIVIG LLMIFGVKSW ETLPMFIPGL LLYVLNAMWI AMLTSLLSAR FRDLPQIIGA
LLQVAFYVTP IIFRPDALNR FSFIVEWNPL AYLIDVVRGP LIGQMPSALT WGVTIGMAVI
GWPIALLMTG RYLKRLPYWV