| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0379 |
|---|
| Symbol | |
|---|
| ID | 4091508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 419948 |
|---|
| End bp | 420814 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638013638 |
|---|
| Product | phosphomethylpyrimidine kinase type-1 |
|---|
| Protein accession | YP_620264 |
|---|
| Protein GI | 107021937 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.204738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCA ACGCCCCTCC GATCGTCCTC ACCTTCGGCC TGTCCGATCC CACCGGCGGC
TCCGGCCTCC AAGCCGATCT GATGACCCTG GCGAGCATGG GCTGTCACGG CGTGTCCGTC
CTGACCGGCT ATACCGTGCG CGACTCGGCC GCCTGCGATG AAGTCACCGG CCTCGACCCC
GATGTCGTCG CCGCGCAGGC GCGCATGCTG CTCGAAGACA TGCCGGTTGC CGCGTTCAAG
ATCGGCGCGG CGACGCGCGC GGAAGTCGTC AGCGCGATCG CCGAAGTCGT CGCCGACTAC
GACGGCGTGC CGCTCGTGCT CGCGCCGGAC TTCACGCTCG ACGATGAACA CGTGCTCGCC
GCCGACGACC TGCGCGAATC GATCGCCGAC CTGCTGGCGC CGCAAACCAC GTTGCTGGTC
GCCGACCACG CGACGCTGAT CGCGCTCGCG CAACCGGACG GCGATGCCGA GGCGCCGAAT
CTCGACGCGG CCGTGTCGCA TCTGCTGTCG CAGGGCTGCG AATACATCCT GTCGTCGGAA
ACCGGTTCGC ACCGGCTCGT CAATACGCTG TACGGCGAGG AAGGCCAGCT TCGCGAAGAC
ATGTGGGATC GCTCGCCGCA CCGGCTGATG GGCATCACCG ATACGCTCGG CGCGGCCATC
GCGGCGCTGC TCGCGAACGG TCAGGAGCCG CCCGAAGCCG TGCGCGAGGC ACAGGAATAC
CTGTATCAGG CCGTGCGCGA CGCGTTCCGG CCCGGCATGG GCGCGTACCT GCCTGACCGG
TTCTTCTGGG CGCGCAGCAA CGACGAGTCC GACACGCCGC CGGCCGTGAA GGCCGACCCG
GTGCCGAGGA CGTCGCATCG GCATTGA
|
|---|
| Protein sequence | MSSNAPPIVL TFGLSDPTGG SGLQADLMTL ASMGCHGVSV LTGYTVRDSA ACDEVTGLDP
DVVAAQARML LEDMPVAAFK IGAATRAEVV SAIAEVVADY DGVPLVLAPD FTLDDEHVLA
ADDLRESIAD LLAPQTTLLV ADHATLIALA QPDGDAEAPN LDAAVSHLLS QGCEYILSSE
TGSHRLVNTL YGEEGQLRED MWDRSPHRLM GITDTLGAAI AALLANGQEP PEAVREAQEY
LYQAVRDAFR PGMGAYLPDR FFWARSNDES DTPPAVKADP VPRTSHRH
|
|---|
| |