Gene Bcen_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0372 
Symbol 
ID4091501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp414501 
End bp415016 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content72% 
IMG OID638013631 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_620257 
Protein GI107021930 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.19061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATG AGTCGGACCT GCTGGTGTGG CTTCCGCATC TCACGCGCTA TGCGCGTGCG 
CTGACGGGCG AGCGCGCGTG GGCCGACGAT CTCGTGCAGG ACGCGCTCGA GCGTGCGCTG
AACCGGCCGC CGCGCGACGG CGGCAACCTG CGCGCGTGGC TGCTGACGCT GTTGCGGCAC
CGCTTCATCG ATCAGTTGCG CGCGCGGCAC GAGATCGCGG TCGACGACGC GACGGCGCCG
TGGCAGACGA TGGCTGCCCC CGCCGGCGAG GTCGGCGGCC TGGAGTTGCG CGACGTGCAG
CGCGCGCTGT ACCGGCTGCC GGTCGAGCAG CGCGAGGTGC TGTTGCTGGT CGCGCTCGAG
GAGTTGAGCT ATCGCGATGC CGCGCAAGTG CTCGGCGTGC CGGTCGGCAC GGTGATGTCT
CGGCTCGCGC GGGCGCGTGC GCAGATGCGC GCGTTGCTGT CGGACGCGCC GTCGTCGCAC
GGCACGGCCA CGTTACGGGT GATCGGGAAG CCATGA
 
Protein sequence
MSYESDLLVW LPHLTRYARA LTGERAWADD LVQDALERAL NRPPRDGGNL RAWLLTLLRH 
RFIDQLRARH EIAVDDATAP WQTMAAPAGE VGGLELRDVQ RALYRLPVEQ REVLLLVALE
ELSYRDAAQV LGVPVGTVMS RLARARAQMR ALLSDAPSSH GTATLRVIGK P