| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0367 |
|---|
| Symbol | |
|---|
| ID | 4091496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 409068 |
|---|
| End bp | 410312 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638013626 |
|---|
| Product | D-amino-acid dehydrogenase |
|---|
| Protein accession | YP_620252 |
|---|
| Protein GI | 107021925 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCG ACGTCATCGT TCTGGGGGCC GGCATCGTCG GCGTGTCGTC GGCGCTGCAT
CTGCAGGATC GCGGGCTGCG CGTCGCGCTC GTCGACCGGC GCGCGCCCGG CGAGGAAACC
AGCCACGGCA ATGCCGGGTT GATCGAGCGC TCGTCGGTCG TGCCGTATGC GTTTCCGCGC
CGGCTCGGCA CGCTGCTGCG CTATGCGCGC AACCGCTCGG TCGATCTTTA TTGGGACTAC
CGCGCGCTGC CCGCGTATGC AGGCTGGCTC GCGCGCTTCT GGCGCGAATC GTCGCCGCGG
CGGCTCGCGG CCGCCGCGCG CGACCTGCTG CCGCTCGTCG CGGCGAGCGT CGTCGAGCAC
GATGTGCTGC TCGCGCGCAC CGACGCGCAG CCGCTCGTGC ACGACGGCGG CTGGATCGAG
GCGTTCCGTT CGCCCGCGCT GTTCGATGCG GAAGCGCGCG CGCAGCAGCG CGTGGCCGCC
GCGCACGGGC TGCGGATGAC CGTGCTCGAC GCGCGTGCGC TGCGTGCGCG CGAGCCCGGT
ATCGGCGACG CGTTCTGCGG CGCGTTTCAC TGGCAGGACC CGAAGACCGT GTCGAGCCCG
GGCGGCCTGA CCAAGGCCTA TGCGCGGCTG TTCGAGTGCG ACGGCGGCAC GTTCGTGCGC
GGCGACGCGA CGACGCTCGT GCAGGTCGAC GACGGCTGGC AGGTCCGGAC CGAACACGGG
CCGATCGCGG CGCGCTCGGC CGTGGTCGCG CTCGGGCCGT GGTCCGATCA GGTGTTCGCG
CCGCTCGGCT ACCGGATTCC GCTGCGCGCG AAGCGCGGGT ATCACATGCA CTACCGGCCG
ACGCGCACGC CGTTGAACGT GCCCGTGTGC GATACCGAGG CAGGCTTCGT CGTCGCGCCG
ATGGAGGGCG GCCGCCTGCG GCTCACGACG GGCGTCGAGA TCGCGCTGCC CGACGCGCCG
CCGACCGGCG TGCAGCTCGC GCGCGCCGAA CCGCTGGCGC GTGACGCGTT CGGCATCGGC
GAGCGGCTCG ACCCGGAGCC GTGGCTCGGG ATGCGGCCGT GCACGCCCGA CATGCGCCCG
GTGATCGGGC CCGCGCCGCG CCACCGTCAT CTATGGTTCG CGTTCGGCCA TTGCCATCAC
GGGCTCACGC TCGGGCCCGC GACTGGCCGC CTGCTCGCCG AAATGATGAC GGGTGCGCCG
ACTTATATCG ATCCTCATCC GTACCGGCCT GCCCGCTTCG GCTGA
|
|---|
| Protein sequence | MDFDVIVLGA GIVGVSSALH LQDRGLRVAL VDRRAPGEET SHGNAGLIER SSVVPYAFPR
RLGTLLRYAR NRSVDLYWDY RALPAYAGWL ARFWRESSPR RLAAAARDLL PLVAASVVEH
DVLLARTDAQ PLVHDGGWIE AFRSPALFDA EARAQQRVAA AHGLRMTVLD ARALRAREPG
IGDAFCGAFH WQDPKTVSSP GGLTKAYARL FECDGGTFVR GDATTLVQVD DGWQVRTEHG
PIAARSAVVA LGPWSDQVFA PLGYRIPLRA KRGYHMHYRP TRTPLNVPVC DTEAGFVVAP
MEGGRLRLTT GVEIALPDAP PTGVQLARAE PLARDAFGIG ERLDPEPWLG MRPCTPDMRP
VIGPAPRHRH LWFAFGHCHH GLTLGPATGR LLAEMMTGAP TYIDPHPYRP ARFG
|
|---|
| |