Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0352 |
Symbol | |
ID | 4092848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 390980 |
End bp | 391924 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638013611 |
Product | LysR family transcriptional regulator |
Protein accession | YP_620237 |
Protein GI | 107021910 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.139438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGACG ACCGTACCGC CTCGCTCGAC ATCTGGCTCG TGCGCGTGCT GCGCACGCTG CTGCTCGAGC GCAGCGTCAC GCAGACCGCG TTGCGGCTGA ACCAGACGCA GCCCGCGATC AGCACTGCGC TGCGCAAGCT GCGCGAGACG CTGAACGACC CGATTCTCGT GCGCGGCAAA TCGGGCATGG TGCCGACCGA ATACGGCGCG TCGCTGCTCG AAGCCGCGTC GCGTGCGCTG CGCGAGGTCG ATTTCATCGC GACGCCGCAC GGCGACTTCG ATCCGTCGTC CGCGCGGCGC ACGTTCCGCG TCGCCGCGCC CGACTACCTG AACGACTTCT TCATGCCGAC GCTGATCGAG CGCTTTCGCG ACGCGGCGCC GCATGCCCAT CTGGAAATCG ATTCGCTCAA TCCCGCGCTC GACCACGCGG GCGCGCTCGA ATCGGGCGCG CTCGATCTCG TGATCGGCAA CTGGCCGAAG CCCGACCCGC AGTTCGCGCG CCAGGACCTG TTCTCCGACA CGATCGTGTG CCTGATGCGC GATGCGCATC CGCTTGCCCG CGCGCCGCTC ACGCGCGAAG CGTATGCATC GGCCGCGCAC GTCGCACCGA CGCCGTACAC CGGCGACAAG CGCAACGCGA TCGAAATCGG CCTGGCACGC GCGCGCCTCA CGCGGCGTAT CGTGACGACG CTGCCGTACT TCGGCATCGT GCCGCAGGTG CTGCTGCAGT CGGACCTGAT CTTCACGACG ACGCGCCGCT TCGCGACGCA CTATGCGCAA CTGCTGCCGC TCGTCGTCGT CACGCCGCCC GTGCCGTTCC CGCGCATCAA GAGCTACCTG CTCACGCACC CGCAACCCGA TCGGCCGACC GACATCGCGT GGCTGTGCGC GCTGATGCAG AGCGTGTCCG ACGAACTGAC GGTCGCCCGC ACGCGCAAGC GCTGA
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Protein sequence | MEDDRTASLD IWLVRVLRTL LLERSVTQTA LRLNQTQPAI STALRKLRET LNDPILVRGK SGMVPTEYGA SLLEAASRAL REVDFIATPH GDFDPSSARR TFRVAAPDYL NDFFMPTLIE RFRDAAPHAH LEIDSLNPAL DHAGALESGA LDLVIGNWPK PDPQFARQDL FSDTIVCLMR DAHPLARAPL TREAYASAAH VAPTPYTGDK RNAIEIGLAR ARLTRRIVTT LPYFGIVPQV LLQSDLIFTT TRRFATHYAQ LLPLVVVTPP VPFPRIKSYL LTHPQPDRPT DIAWLCALMQ SVSDELTVAR TRKR
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