Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0347 |
Symbol | |
ID | 4092843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 384097 |
End bp | 385311 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638013606 |
Product | major facilitator superfamily transporter |
Protein accession | YP_620232 |
Protein GI | 162218060 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.148845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCCG ATTCCGCCAC ACCGCCGCGC AGCGGGTTCG CGGTCACGCT GCAAATCGTG TCCGTCGTCT GCTTCACGTT CATCTGCTAT CTGACCATCG GCCTGCCGCT CGCGGTGCTG CCGGGCTTCG TCCACGACGA CCTCGGCTTT TCCGCGATCG TCGCGGGCGG CGCGATCAGC GTCCAGTACT TCGCGACGCT CGCATCGCGG CCGCTCGCCG GGCGCCTCGC CGATACGCTC GGGCCGAAGC AGACCGTGCT GCGCGGGCTG GTCGGCTGCG GCGTGTCGGG CGTGCTGCTG CTCGTCGCGC TGCTGCTCGC GCACTGGCCG GTCGCGAGCC TCGTGCTGCT GGTCGCGAGC CGGCTCGTGC TCGGCGTCGG CGAAAGCCTG TGCGGCACCG GCGCGATCCT GTGGGGCATC GGCCGGGTCG GCGTCGCGCA CAACGCGAAG GTGATCTCGT GGAACGGCAT CGCGACCTAC GGCGCACTCG CGCTCGGCGC GCCGGTCGGC GTCGCGATCG CGCATACGCT GAATCCGGCG CTGATCGGCG TGATCGTGAT CGCGCTGGCC GCGCTCGGCT TCTACCTCGC CCGCCTGATC GCGCCGGTGC CGCTGGTGCA CGGCGAACGG ATGTCGTATG CGAGCGTGTT CACGCGCGTG CTGCCGCACG GCCTCGGCCT CGCGCTCGGT TCGGCCGGCT TCGGCTCGAT CGCCACCTTC GTCACGCTGT ACTACGCGGC GCGCCACTGG CCGAACGCCG CGCTGTCGCT GACGGTATTC GGCACGCTGT TCATCGGCGC GCGCCTGCTG TTCGCGAACA CGATCAAGAC CTACGGCGGC TTCCGCGTCG CGATCGTGTC GTTCGCGTTC GAATCCGCGG GCCTTTTGCT GCTGTGGCTC GCGCCGGTGC CGCACGTCGC GCTCGTCGGC GCGGCGCTCA CGGGCTTCGG CTTCGCGCTG ATTTTCCCGG CGCTCGGCGT CGAGGCCGTC GCGCTCGTGC CGCCCGCGAG CCGCGGCGCG GCGCTGTCCG CGTACTCGGT GTTCCTCGAT CTGTCGCTCG GTATCACCGG CCCGCTGGCC GGCTATGTCG CGGGTGCGTT CGGCTATCCG CAGGTGTTCC TGTTCGCGGC GGTGGCGGCC GCCGCGGGCG TCGCGCTGTC GATGGTGCTG TACCAGCGGC AGGCGCGCGT CGCGGGGAGC GGCGCGGCGG CGTGA
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Protein sequence | MSSDSATPPR SGFAVTLQIV SVVCFTFICY LTIGLPLAVL PGFVHDDLGF SAIVAGGAIS VQYFATLASR PLAGRLADTL GPKQTVLRGL VGCGVSGVLL LVALLLAHWP VASLVLLVAS RLVLGVGESL CGTGAILWGI GRVGVAHNAK VISWNGIATY GALALGAPVG VAIAHTLNPA LIGVIVIALA ALGFYLARLI APVPLVHGER MSYASVFTRV LPHGLGLALG SAGFGSIATF VTLYYAARHW PNAALSLTVF GTLFIGARLL FANTIKTYGG FRVAIVSFAF ESAGLLLLWL APVPHVALVG AALTGFGFAL IFPALGVEAV ALVPPASRGA ALSAYSVFLD LSLGITGPLA GYVAGAFGYP QVFLFAAVAA AAGVALSMVL YQRQARVAGS GAAA
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