Gene Bcen_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0344 
Symbol 
ID4092840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp380775 
End bp381986 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content68% 
IMG OID638013603 
Productaminotransferase, class V 
Protein accessionYP_620229 
Protein GI107021902 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG ATTACTCGCC GATTCCCTGT CCCGTCGTCG TGCCGCTCGA CGCGATCCTG 
CCCGAAGAAC CGCTGCTGAT GATGGGGGCC GGCCCGGTTC CGATCCCGGC CGCGGTGGCC
AAGGCGAACA CGATCGTGAT CAACCACCTC GGCGCGACGA TGGCGAAGAT CATCGAGCAG
GTGAAGGAGA TGGCGCGTTA CGTGTTCCAG ACCCGCACGA AGTGGGTGCT CGGCGTCGCG
GGCCCGGGCT CGGCCGCGAT GGAAATGGCG ATCTCGAACC TCGCATGGCG CGGCACGCGC
GTGCTGTCGA TCCGCAACGG CTTCTTCAGC GCGCGGATGG CCGAGATGGC CACGCGTGTC
GGCGCCGACG TCGCGACGCT CGAAGTGGCC GATCGCGCGG TGGCGAGCCT CGACGAGATT
GCCGACGCGA TCGCGCGCGA GCGGCCCGAG ATCGTCACGA TCGTGCAGGG CGAGACGTCG
AACACCGTGT GGAACCGCGA CCTGCGCGAC ATCGCGGCGC TCGCGAAGGC GGCCGGCGCG
CTGGTCGTCG TCGACGCGGT GTGCACGCTG TCGACGATGC CGCTCGAGAT GGACGCGTGG
GGCATCGACG CGGTGATCAC CGGCGGCCAG AAGGGGCTGT CGTCGATCCC GGGCGTGTCG
CTGATCGCGT TCTCCGATGC CGCGTGGGAG CGTATGAAGA CGCGCCCCGA GCCGAACGCG
CACTGGTGTC TCGACATGGC GCTCGCGGAG AATTTCTGGC ACAACGCCGG CTATCACTAC
ACGGCGCCCG TGTCGGGTGT GCTCGCGCTG CACGAGGCGC TGCGGCTCGT CTGCGCGGAA
ACGCTCGAAA GCCGCTTCGC GCGCCACCTG CGCTGCTCGC TGGCGCTGCA GGCAGGCGTC
GAATCGATGG GGCTCAAGCT CTATGCGCCG AAGGACTGCC GGCTCAATTC GGTGGTCGGG
ATTGAAACGC CGGAGGGGCT GACGCCCGGG ATGGTCTGCG GCCATATCTC GAAGCAGTAC
CAGGTCGAGA TCTCGGGTTC GTTCGGGTTG CCGATCGTGC GGATCGGGCA GATGGGCGAG
CAGTGCCGCG AACACAACCT GTTCCGCACG CTGCATGCGT TCGGCCGCAC GATGGTCGAC
CTGAAGGTGC CGGTCGACCT GCCGGCCGGC GTCGCGGCGC TCGAACAGGA ACTGTCGCGG
CGCGGCGCGT AA
 
Protein sequence
MSIDYSPIPC PVVVPLDAIL PEEPLLMMGA GPVPIPAAVA KANTIVINHL GATMAKIIEQ 
VKEMARYVFQ TRTKWVLGVA GPGSAAMEMA ISNLAWRGTR VLSIRNGFFS ARMAEMATRV
GADVATLEVA DRAVASLDEI ADAIARERPE IVTIVQGETS NTVWNRDLRD IAALAKAAGA
LVVVDAVCTL STMPLEMDAW GIDAVITGGQ KGLSSIPGVS LIAFSDAAWE RMKTRPEPNA
HWCLDMALAE NFWHNAGYHY TAPVSGVLAL HEALRLVCAE TLESRFARHL RCSLALQAGV
ESMGLKLYAP KDCRLNSVVG IETPEGLTPG MVCGHISKQY QVEISGSFGL PIVRIGQMGE
QCREHNLFRT LHAFGRTMVD LKVPVDLPAG VAALEQELSR RGA