Gene Bcen_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0342 
Symbol 
ID4092838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp377989 
End bp378987 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID638013601 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_620227 
Protein GI107021900 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGTGA TCCTGTTCAG CAGCCGGCAG TACGACGACG ATTCGTTCAC CGCCGCCAAC 
CGGCAGTTCG GCTATCGGCT GCACTTCCAG CCGTCGCACC TCGACGCGGA AACGGCGATT
CTCGCGCACG GCTATGACGT GGTCTGCCCG TTCGTCAACG ACACCGTCGA CGCGGCCGTG
CTCGAACGGC TCGCCGACGG CGGCACGCGG CTGATCGCCC TGCGCTCGGC GGGCTTCAAC
CATGTCGACC TCGCCGCCGC CGAACGGCTC GGCATCACGG TCGTGCGCGT GCCCGCGTAT
TCGCCGCATG CGGTCGCCGA GCACGCGGTC GCGCTGATCC TCGCACTCAA TCGCCGCCTG
CCGCGCGCGG TCGCCCGCAC CCGCGAAGGC GACTTCTCAC TGAACGGACT GCTGGGCTTC
GACCTGCACG GCAAGACCGT CGGCGTGATC GGCACTGGCA TCATCGGCAG CGTGTTCGCG
AAGATCATGA TGGGCTTCGG GATGCACGTG CTCGCGCATT CGGTGCCGCC GTACAACGAC
GAGCTGATCG CGTTCGGTGC GCGCTACGTC GAGCTCGACG AGCTGCTGCA TCATGCCGAC
ATCGTCAGCC TGCATTGCCC GCTGCTGCCG TCGACACACC ACCTGATCAA CGAGCGGACG
CTCGCGCGGA TGAAGCACGG CGCGATGCTG ATCAACACCG GGCGTGGCGG CCTCGTCGAT
GCGCAGGCGC TGGTCGACGC GCTCAAGAGC GGCCAGCTCG GCCATCTCGG GCTCGACGTG
TACGAGGAGG AAAGCGGGCT CTTCTTCGAG GATCACTCCG ACCTGCCGCT GCAGGACGAC
GTGCTCGCGC GCCTGCTGAC GTTCCCGAAC GTGATCGTCA CATCGCACCA GGCGTTCTTC
ACGCGCGAGG CGCTGGCCGA GATCGCACAC ACGACGCTGC TGAACATCGA GGCGTGGCAT
GCGGGCGCGC CCGCGAACGT CGTGATCGCA AACCGCTGA
 
Protein sequence
MRVILFSSRQ YDDDSFTAAN RQFGYRLHFQ PSHLDAETAI LAHGYDVVCP FVNDTVDAAV 
LERLADGGTR LIALRSAGFN HVDLAAAERL GITVVRVPAY SPHAVAEHAV ALILALNRRL
PRAVARTREG DFSLNGLLGF DLHGKTVGVI GTGIIGSVFA KIMMGFGMHV LAHSVPPYND
ELIAFGARYV ELDELLHHAD IVSLHCPLLP STHHLINERT LARMKHGAML INTGRGGLVD
AQALVDALKS GQLGHLGLDV YEEESGLFFE DHSDLPLQDD VLARLLTFPN VIVTSHQAFF
TREALAEIAH TTLLNIEAWH AGAPANVVIA NR