Gene Bcen_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0340 
Symbol 
ID4090813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp375678 
End bp376847 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content70% 
IMG OID638013599 
Productmajor facilitator transporter 
Protein accessionYP_620225 
Protein GI107021898 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTGC CTCTTTTCGC CCTTGCCGTC GCCGCATTTG GAATCGGTAC CACCGAATTC 
GTGATCATGG GGCTGCTGCC CAATGTCGCG CGCGACCTCG GCGTGTCGAT CCCGGCCGCC
GGGATGCTCG TGTCGGGCTA CGCGCTCGGC GTGACGATCG GCGCGCCGAT CCTCGCGATC
GTCACCGCGA AGATGCCGCG CAAGCGTGCG CTGATGAGCC TGATCGGGCT GTTCATCGCC
GGCAACCTGT TCTGCGCGAT CGCGCCCGGC TACGCGGTGC TGATGGCCGC GCGCGTCGTC
ACCGCGTTCT GCCACGGTGC GTTCTTCGGG ATCGGCTCGG TGGTCGCGAG CAACCTCGTC
GCACCGAACC GCCGCGCACA GGCGATCGCG CTGATGTTCA CCGGCCTCAC GCTCGCGAAC
GTGCTCGGCG TGCCGCTCGG CACCGCGCTC GGCCAGGCGT TAGGCTGGCG CGCGACGTTC
TGGGCCGTCA CCGGCATCGG CATCGCCGCG GCCGCCGCGC TCGCGGTGTG CCTGCCGAAG
AACCTCGCGA TGCCCGACAC CAGCATCACG CGCGAATTCA GCGTGCTGAA GCACCCGCAG
GTGCTAATGG TGCTCGGCAT CAGCGTGCTC GCGTCCGCGA GCCTGTTCAG CGTGTTCACG
TACATCACGC CGATCCTCGA GGACGTGACG GGCTTCTCGC CGCGCCAGGT CACCTACGTG
CTGCTGCTGT TCGGCCTCGG CCTGACCGTC GGCGGCACGC TCGGCGGCAA GCTCGCCGAC
TGGCGCCGGA TGCCGTCGCT GATCGCGACG CTCGCGCTGA TCGGCATCGT CCTCGCGCTG
TTCGCGGGAA CGATGCATCT GCCGTTCGCC GCGCTCGCGA CGATCTTCGT GTGGGGCATC
CTGGCGTTCG CGATCGTGCC ACCGCTGCAG ATCATGATCG TCGATCGCGC GAGCGACGCG
CCGAACCTCG CGTCGACGCT CAACCAGGGC GCGTTCAACC TCGGCAACGC GACCGGCGCG
TGGCTCGGCG GGATGGCGAT CGGCTCGGGC GTGTCGCTCG TGAGCCTGCC GTGGGTCGGC
GTCGCGATGG CGATCGCCGC GCTCGCGCTC ACGCTGTGGT CGGCGTCGCT CGAACGCCGG
CCGGTGGTCG TGCCGACCGA GTACGTGTGA
 
Protein sequence
MPLPLFALAV AAFGIGTTEF VIMGLLPNVA RDLGVSIPAA GMLVSGYALG VTIGAPILAI 
VTAKMPRKRA LMSLIGLFIA GNLFCAIAPG YAVLMAARVV TAFCHGAFFG IGSVVASNLV
APNRRAQAIA LMFTGLTLAN VLGVPLGTAL GQALGWRATF WAVTGIGIAA AAALAVCLPK
NLAMPDTSIT REFSVLKHPQ VLMVLGISVL ASASLFSVFT YITPILEDVT GFSPRQVTYV
LLLFGLGLTV GGTLGGKLAD WRRMPSLIAT LALIGIVLAL FAGTMHLPFA ALATIFVWGI
LAFAIVPPLQ IMIVDRASDA PNLASTLNQG AFNLGNATGA WLGGMAIGSG VSLVSLPWVG
VAMAIAALAL TLWSASLERR PVVVPTEYV