Gene Bcen_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0322 
Symbol 
ID4090795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp358326 
End bp359072 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content68% 
IMG OID638013581 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_620207 
Protein GI107021880 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTGT TCGTCACAGG TGCGTCCGCC GGCTTCGGCG CCGCCATCTC CCGTGCCTTC 
GTCAAGGGCG GCCATCGCGT CGTCGCCACC GCACGCCGCA AGGATCGCCT CGATGCGCTC
GCGGCCGAAC TCGGCGACGC GCTGCTGCCG TTCGAGCTCG ACGTGCGCGA CCGCGCGGCC
GTCGAAGCCG TGCCGGCCGC CCTTCCCGCC GAATTCGCGG CGCTCGACGT GCTCGTCAAC
AACGCCGGCC TCGCGCTCGG CGTCGAGCCG GCCCAGAAGG CGAGCCTCGA CGAGTGGCAG
ACCATGATCG ACACGAACTG CTCGGGCCTC GTGACCGTCA CGCACGCATT GCTGCCGGGC
ATGATCGCGC GCGGTCGCGG CCATATCTTC AATCTGGGTT CGGTGGCCGG CACCTATCCG
TATCCGGGCG GGAACGTCTA CGGCGCGACC AAGGCTTTCG TCAGACAATT CAGCCTGAAC
CTGCGCACTG ACCTGATCGG CACGCCGTTG CGCGTCACCG ACATCGAACC GGGCCTGTGC
GGCGGCACGG AATTCTCGAA CGTCCGCTTC CGCGGCGACG ATGCAAAGGC GGCGAACGTC
TACCAGAACG TCCAGCCGCT CACGGCGGAG GACATCGCCG ATACGATCTA CTGGATCGCC
ACGCGCCCCG CGCACGTCAA CATCAATACG ATCGAAATGA TGCCGGTCGC GCAAGCGCCG
GCCGGCCTCA CGATCCATCG CGGCTGA
 
Protein sequence
MIVFVTGASA GFGAAISRAF VKGGHRVVAT ARRKDRLDAL AAELGDALLP FELDVRDRAA 
VEAVPAALPA EFAALDVLVN NAGLALGVEP AQKASLDEWQ TMIDTNCSGL VTVTHALLPG
MIARGRGHIF NLGSVAGTYP YPGGNVYGAT KAFVRQFSLN LRTDLIGTPL RVTDIEPGLC
GGTEFSNVRF RGDDAKAANV YQNVQPLTAE DIADTIYWIA TRPAHVNINT IEMMPVAQAP
AGLTIHRG