Gene Bcen_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0320 
Symbol 
ID4092346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp356911 
End bp357588 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID638013579 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_620205 
Protein GI107021878 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACTG TTCAAGACCT GTCGATCATT TCCCTCGTCC TCAACGCGAG CGTGCTGGCC 
CAGGCGGTGA TGGGACTGCT GCTGCTGCTG TCGCTGATGT CGTGGACCTT CATCTTCCGC
AAGTGGTTCG CGATCCGCCG CGCGCGTGCC CAGACCGAAC GCTTCGAGAA GGATTTCTGG
TCGGGCGGCG ACCTGCAGGC GCTGTACCAG AGCGCCGCCA ACAACCGCCA TACGATCGGC
GCACTCGAGC GGATCTTCGA ATCGGGGATG CGCGAATTCC TGAAGGCGAA GGAAAAGCGC
CTCAGCGATC CGGGCCTCGT GCTCGATGGC GCCCGCCGCG CGATGCGCGC GTCGTTCCAG
CGTGAAATGG ACGTGCTCGA AGCCAACCTC GCATTCCTCG CGTCGGTCGG CTCGGTCAGC
CCGTACATCG GTCTGTTCGG CACGGTCTGG GGGATCATGA ACTCGTTCCG CGGCCTCGCG
AACGTGCAGC AGGCCACGCT CGCGAACGTC GCGCCGGGCA TCGCCGAGGC GCTCGTCGCC
ACCGCGATCG GCCTGTTCGC CGCGATTCCG GCGGTGGTCG CGTACAACCG CTACGCGCAC
GACATCGACC GCCTCGCGAT CCGCTTCGAG ACCTTCATCG AAGAGTTCTC GAACATCCTG
CAGCGTCAGG CCCAGTAA
 
Protein sequence
MNTVQDLSII SLVLNASVLA QAVMGLLLLL SLMSWTFIFR KWFAIRRARA QTERFEKDFW 
SGGDLQALYQ SAANNRHTIG ALERIFESGM REFLKAKEKR LSDPGLVLDG ARRAMRASFQ
REMDVLEANL AFLASVGSVS PYIGLFGTVW GIMNSFRGLA NVQQATLANV APGIAEALVA
TAIGLFAAIP AVVAYNRYAH DIDRLAIRFE TFIEEFSNIL QRQAQ