Gene Bcen_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0319 
Symbol 
ID4092345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp356451 
End bp356900 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID638013578 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_620204 
Protein GI107021877 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.586711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAA GCCCCATCCG ATCCAGCATG CGCGGCGGCC GCTCGCGCCG CGCAATGGCC 
GACATCAACG TCGTGCCGTA CATCGACGTG ATGCTGGTGC TGCTCGTGAT CTTCATGGTC 
ACAGCACCGC TCGTCGCGCC GTCGATCATC AACCTGCCGA CCGTCGGCAA CGCCGCGCCG 
CAGGAGCAGA CGCCGCCCGT CGTCGTCAAC ATCAAGGCCG ACCGCACGAT GAGCGTCAAG 
TACAAGGGCG ACTCGGGCGC GACCCAGGAA GACACGATGA CGAAGGCCGA GCTCGACAGC 
TTCATCTCGG CCCGTCAGGC CGATCACCCT GACCAGCCGG TCGTGATCGC AGCCGACAAG 
ACCGTGCAGT ACGATGCCGT CATGACCGTG ATGTCCGATC TGAAGGCGCG TGGCGTCAAG 
CGCGTCGGCC TCCTCGTCAA ATCGCAATGA
 
Protein sequence
MAGSPIRSSM RGGRSRRAMA DINVVPYIDV MLVLLVIFMV TAPLVAPSII NLPTVGNAAP 
QEQTPPVVVN IKADRTMSVK YKGDSGATQE DTMTKAELDS FISARQADHP DQPVVIAADK 
TVQYDAVMTV MSDLKARGVK RVGLLVKSQ