| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0317 |
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| Symbol | tolB |
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| ID | 4092343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 353994 |
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| End bp | 355289 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638013576 |
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| Product | translocation protein TolB |
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| Protein accession | YP_620202 |
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| Protein GI | 107021875 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0520547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGA TGACAAAGCT AGGTTTCAGG GCACTCGTGG CCTCGTGTCT GATCACGGCG
GGCAGCGCCG CTAACGCCCA GGTCAACGTG CTGATCACCG GTGTCGGGTC GACCCAGTTC
CCCATTGCCA CCGCGAACTT CACGAACGAG GCGAATCTGC CGCAGCAGGT CACGTCGATC
GTGCGCGCCG ACCTCGCCCG CAGCGGCAAA TTCACCAACA TCGACGCGGG CAGCACGCCC
GTGCCCGAGA CCGCCTCGGT CGATCTCGGC GCATGGAAGG CCAAGGGCGC GAATGCGTTC
GTCGCCGGCA GCGTGAACCG CGACGCGAAC GGTCAGTACA AGGTCAACTT CATCCTGTAC
GACACCGTGA AGCAGCAAAG CCTCGGCGGC CTGTCGCTGA CGGCCACCGA CACCACGCTG
CGCACGGCCG GCCACAAGAT CGCCGACTAC ATCTATCAGA AGCTGCTCGG CGTGCGCGGC
GTGTTCGCCA CGCGCCTGTC GTACGTGATC AAGACCGGCA ACCGCTACCA GCTGCAGATT
TCCGATTCGG ATGGCCAGAA CGCGCGCATC GCGCTGTCGA GCACCGAGCC GATCATCTCG
CCGGCCTGGT CGCCGAGCAG CACGAAGGTC GCGTACGTAT CGTTCGAGCG CAAGAAGCCG
ATCGTCTACA TCCACGACCT GCCGACCGGT CGCCGCTACA TGGTCTCCGA CCAGAAGGGC
AACAACAGCG CACCGGCGTG GTCGCCGGAC AGCAACACGC TGGCCGTCGC GCTGTCGCTG
ACGGGCAATA CGCAAATCTA TACGGTCAAC GCGAACGGCG GCGGCCTGCG CCGTCTCACG
CAGAGCAGCT CGATCGACAC CGAACCGTTC TACTCGCCGG ACGGTCGCTG GATCTACTTC
ACGAGCGATC GTGGCGGTGC GCCGCAAATC TACCGGATGC CCGCGCAGGG TGAAAGCGCC
GGCGCCGCGC AGCGCGTGAC CTTCACCGGC AGCTACAACA CGAGCCCGCG CGTGAGCCCG
GACGGCAAGC TGCTCGCTTA CATCTCCCGC ACGGGTGGGG GCTTCAAGCT GTACGTTCAG
GATCTGCAGA CTGGCGCGGC GAACGCCATC ACGAATACCA ATCGCGACGA ATCGCCGAGC
TTCGCGGCAA ACGGCCAGTA CGTTCTGTAC GCTACCCAGT CAGGTGGTCG CAACGTTCTG
GCTGCAGTGC CCTCCGACGG CAGCGCGCCG CCGCAGATCT TGTCCGTCCA GGGCGGCTCC
GTTCGCGAGC CGTCGTGGGG GCCCTTCATG CAATGA
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| Protein sequence | MSLMTKLGFR ALVASCLITA GSAANAQVNV LITGVGSTQF PIATANFTNE ANLPQQVTSI
VRADLARSGK FTNIDAGSTP VPETASVDLG AWKAKGANAF VAGSVNRDAN GQYKVNFILY
DTVKQQSLGG LSLTATDTTL RTAGHKIADY IYQKLLGVRG VFATRLSYVI KTGNRYQLQI
SDSDGQNARI ALSSTEPIIS PAWSPSSTKV AYVSFERKKP IVYIHDLPTG RRYMVSDQKG
NNSAPAWSPD SNTLAVALSL TGNTQIYTVN ANGGGLRRLT QSSSIDTEPF YSPDGRWIYF
TSDRGGAPQI YRMPAQGESA GAAQRVTFTG SYNTSPRVSP DGKLLAYISR TGGGFKLYVQ
DLQTGAANAI TNTNRDESPS FAANGQYVLY ATQSGGRNVL AAVPSDGSAP PQILSVQGGS
VREPSWGPFM Q
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