Gene Bcen_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0305 
Symbol 
ID4092330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp346264 
End bp346593 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content67% 
IMG OID638013563 
Productalkylhydroperoxidase AhpD core 
Protein accessionYP_620190 
Protein GI107021863 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAACT GGAACGAATA CCGGAAGGAA CTCTCGACGC GTATCGGCGA CATCGCCAAG 
CTGTCGCCCG ATACGCTGGC CGGCTACAAG GCGCTGTCCG GCGCGGGCGC CAAGACCGGC
CATCTCGACG CGAAGACGCG CGAGCTGATC GCGCTCGCTG TGGCCGTCAC GACGCGCTGC
GACGGCTGTA TCGCCGTGCA TACGGCCGAA GCGGCCAAGC ATGGCGCGAC CAAGGAGGAA
GTGGCGGAAG CGCTCGGCGT CGCGATCGCG TTGAATGCGG GTGCGGCGCT CGTCTATTCG
GCGCGTGTGA TGGACGCGCT CGGCGACTGA
 
Protein sequence
MLNWNEYRKE LSTRIGDIAK LSPDTLAGYK ALSGAGAKTG HLDAKTRELI ALAVAVTTRC 
DGCIAVHTAE AAKHGATKEE VAEALGVAIA LNAGAALVYS ARVMDALGD