| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0296 |
|---|
| Symbol | |
|---|
| ID | 4092397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 329710 |
|---|
| End bp | 330915 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638013554 |
|---|
| Product | capsule polysaccharide biosynthesis |
|---|
| Protein accession | YP_620181 |
|---|
| Protein GI | 107021854 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3562] Capsule polysaccharide export protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.343369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGAT CCTTCCTTGC CTTGCAAGGC ACGGCTTCCC CGTTCTTCGG CCGGCTCGCG
TCTGCGTTGC GTGACCGAGG CCATGCGGTG CGCAGGGTAA ATTTCTGCGG CGGAGATTTT
GCTTACAGTT GTAAAGGGGC GGCCCTGAAC TACAGCGGCC AAGCGAGCGA TCTTCCCGCG
TGGTACCAAG AAGTGCTGCA GGCAGGCAGC TATTCAGACA TCCTCATGTT CGGCGATTGT
CGTGAGGTGC ATGCGCATGT TCATCCAATA TCGCAGGCGA TGGGCGTAAG GGTGCATGTG
TTCGAGGAGG GCTATGTGCG GCCGCATTGG CTGACGCTCG AGACGCATGG TGTCAACGGG
TGCTCACTGC TGTCGCGCGA TCCGAAATGG TATTTCGATC GGCGTGGCGT GATACCCCCC
AGTCCGGCTG GCTTGCCGAC GGGCTACAAT CTCTATGAAC GCTCCTTGCA CGATATCCTA
TATCGCAGTG CCAATGCATT CTATGCTGCG AGGTTCCCCA ACTATCGATC GCATCGGCCG
AAGAATGGTG TGGTCGAATA TGCTGGATTG GGGTTGCGCG CGCTCCAGCA GGGCGGGCAT
CGCCGTGAGG CGACCAAAGT AACGAAAGCG CTGCTTGACG AGGGGCGTGC ATATTATCTG
TTTCCGTTGC AACTTAATTC CGATGCACAG ATAGTTTTTC ATTCTCCATT TGATGGGATG
TGCAGTGCAA TCGATCGCGT CATGCGGTCG TTTGCTGCTC ATTCGCCTGC GGGCAGTCTC
CTCGTAATCA AAAATCATCC GCTTGACACG GGGCTAATCA ATTATCGACG CTTCGTCTCC
CAGCTTGCCG GGGGCCTGGG TCTTGCTGAC CGGCTGCGCT TTATTGACTC CGGGCATCTG
CCAACGTTGC TGGAGCACGC GCGAGGTGTC GTGGTCGTGA ATAGCACGGT CGGGCTGTCC
GCAATCCATC ATTGCCGCCC GCTCATCACG TTGGGAACCG CGATCTACGA TATGCCAGGC
CTCACTTGGC AAGGGGCGTT CGAGGATTTC TGGACGCAGG CTGAACGTCC CGACATGGCA
CTTTATCAAG TATTCCTCGA CTACATCATG CATCACACCC AGATCAACGG CGACTTTTAC
ACCCGTACCG GAATTGAGAT GGCGGTTGAG CGCACGGTCA TGCGGCTGGA GGCAACGCGT
GTCTAG
|
|---|
| Protein sequence | MHRSFLALQG TASPFFGRLA SALRDRGHAV RRVNFCGGDF AYSCKGAALN YSGQASDLPA
WYQEVLQAGS YSDILMFGDC REVHAHVHPI SQAMGVRVHV FEEGYVRPHW LTLETHGVNG
CSLLSRDPKW YFDRRGVIPP SPAGLPTGYN LYERSLHDIL YRSANAFYAA RFPNYRSHRP
KNGVVEYAGL GLRALQQGGH RREATKVTKA LLDEGRAYYL FPLQLNSDAQ IVFHSPFDGM
CSAIDRVMRS FAAHSPAGSL LVIKNHPLDT GLINYRRFVS QLAGGLGLAD RLRFIDSGHL
PTLLEHARGV VVVNSTVGLS AIHHCRPLIT LGTAIYDMPG LTWQGAFEDF WTQAERPDMA
LYQVFLDYIM HHTQINGDFY TRTGIEMAVE RTVMRLEATR V
|
|---|
| |