Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0293 |
Symbol | |
ID | 4092394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 325314 |
End bp | 326096 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638013551 |
Product | ABC-2 type transporter |
Protein accession | YP_620178 |
Protein GI | 107021851 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTTC TTCATCGAGT TCTCCTTGCC TCTAGGATAA GAGAACTCAC TTGCCGTTTG GCTACACGAT CCGTCTCAGG TCAACGCCAC AATTTCGGCT TTCTGTGGCT CTTTCTCGAG CCGATGATGT TCACGTCGGG GGTCACGATC GTCTGGTCCC TCGGACACTT CACCCACGGC TCGAATCTGC CCATCGCCGG CTTCGCCGTA ACTGGCTACT CGTCACTGCT TGTCTGGCGA AATTCTGGGA ATCGGTGTTC GAAGGCGATT GAACCAAACC TGAGTTTGCT ATACCACCGC AACGTCCGGG TGCTCGACGT CTTCCTGTCA CGCCTGATTC TCGAGACAGC AGGCGCGACA GCATCTCTGT CGCTCCTGAT CCTTATCTTT ACCGCGCTCG GCTTAGCTAC GTTTCCTGCA GACCTACTCA CAATGACGAC CGGCTGGCTG TTGCAATGCT GGTTCGCATT CGCCATCGGC CTTACAATCG GTGCGGCATC GGAGCGCTCG GAGGTGTTTG AGCGAGTATG GCACACCGCC ACGTACCTGC TCTTCCCGTT CTCGGGTGCT GTCTTCATGG TCGACTGGCT ACCCAAAGCT GTCCACCCGT ACATTCTCGT ATTGCCAATG GTTCACGGCG CCGAAATGAT CCGGCACGGC TATTTTGGAA ACATTGTCCG AACCCATGAA GATCCAATCT ATTTCATCGC CGCCAATTCG GTGCTTACGC TGATCGGAAT GATGCTCGTC AGGGACGTCA GCAAGCGTGT GGAGCCCGAA TGA
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Protein sequence | MSLLHRVLLA SRIRELTCRL ATRSVSGQRH NFGFLWLFLE PMMFTSGVTI VWSLGHFTHG SNLPIAGFAV TGYSSLLVWR NSGNRCSKAI EPNLSLLYHR NVRVLDVFLS RLILETAGAT ASLSLLILIF TALGLATFPA DLLTMTTGWL LQCWFAFAIG LTIGAASERS EVFERVWHTA TYLLFPFSGA VFMVDWLPKA VHPYILVLPM VHGAEMIRHG YFGNIVRTHE DPIYFIAANS VLTLIGMMLV RDVSKRVEPE
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