Gene Bcen_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0293 
Symbol 
ID4092394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp325314 
End bp326096 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content55% 
IMG OID638013551 
ProductABC-2 type transporter 
Protein accessionYP_620178 
Protein GI107021851 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTTC TTCATCGAGT TCTCCTTGCC TCTAGGATAA GAGAACTCAC TTGCCGTTTG 
GCTACACGAT CCGTCTCAGG TCAACGCCAC AATTTCGGCT TTCTGTGGCT CTTTCTCGAG
CCGATGATGT TCACGTCGGG GGTCACGATC GTCTGGTCCC TCGGACACTT CACCCACGGC
TCGAATCTGC CCATCGCCGG CTTCGCCGTA ACTGGCTACT CGTCACTGCT TGTCTGGCGA
AATTCTGGGA ATCGGTGTTC GAAGGCGATT GAACCAAACC TGAGTTTGCT ATACCACCGC
AACGTCCGGG TGCTCGACGT CTTCCTGTCA CGCCTGATTC TCGAGACAGC AGGCGCGACA
GCATCTCTGT CGCTCCTGAT CCTTATCTTT ACCGCGCTCG GCTTAGCTAC GTTTCCTGCA
GACCTACTCA CAATGACGAC CGGCTGGCTG TTGCAATGCT GGTTCGCATT CGCCATCGGC
CTTACAATCG GTGCGGCATC GGAGCGCTCG GAGGTGTTTG AGCGAGTATG GCACACCGCC
ACGTACCTGC TCTTCCCGTT CTCGGGTGCT GTCTTCATGG TCGACTGGCT ACCCAAAGCT
GTCCACCCGT ACATTCTCGT ATTGCCAATG GTTCACGGCG CCGAAATGAT CCGGCACGGC
TATTTTGGAA ACATTGTCCG AACCCATGAA GATCCAATCT ATTTCATCGC CGCCAATTCG
GTGCTTACGC TGATCGGAAT GATGCTCGTC AGGGACGTCA GCAAGCGTGT GGAGCCCGAA
TGA
 
Protein sequence
MSLLHRVLLA SRIRELTCRL ATRSVSGQRH NFGFLWLFLE PMMFTSGVTI VWSLGHFTHG 
SNLPIAGFAV TGYSSLLVWR NSGNRCSKAI EPNLSLLYHR NVRVLDVFLS RLILETAGAT
ASLSLLILIF TALGLATFPA DLLTMTTGWL LQCWFAFAIG LTIGAASERS EVFERVWHTA
TYLLFPFSGA VFMVDWLPKA VHPYILVLPM VHGAEMIRHG YFGNIVRTHE DPIYFIAANS
VLTLIGMMLV RDVSKRVEPE