Gene Bcen_0292 details

Gene Information

• Locus tag: Bcen_0292
• ID: 4092393
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: -
• Start bp: 324661
• End bp: 325317
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 638013550
• Product: ABC transporter related
• Protein accession: YP_620177
• Protein GI: 107021850
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGCGA TCAAAGCTGT TACAAAGGTA TATCACACCC GCCAAGGCCC GCGCGTCGTT 
CTTGACCAGA TCGACCTGAA TGTCCAGAGA GGAGAAAAAA TCGGCATCCT CGGACGCAAT 
GGCGCAGGAA AATCGACGCT AATCCGGATG ATCAGCGGCG CCGAATTTCC AACCTCTGGC 
GACATTGAGC GCAATATGAC CATTTCATGG CCGCTCGCGT TCGGTGGAGC ATTTCAGGGC 
AGCCTCACTG GGTACGATAA CCTTCGATTC ATTTGCCGCA TCTACGGCGT GGATTTCACT 
AAGGTAGCGC CTTACGTGGA TGATTTTTCC GAACTCGGCA TGTACTTGCG GGAACCGGTC 
AAAAAATACT CGTCGGGGAT GCGGGCTCGG CTCGCGTTCG CAATTTCCTT GGCAGTCGAC 
TTCGATTGCT TCTTGATCGA TGAAATTGTA GCCGTTGGTG ATGCGCGCTT TCACGCGAAA 
TGCCATAACG AATTATTCGA AAAGAGAAAG GATCGCGCCA TGATTATCGT TTCCCACGAT 
GCCGGATACA TGCGCGAACA TTGCGATCGG GCCGCCGTAC TCGTGTCTGG GAAGTTGCAC 
AATTTTGACA CGGTCGACAA CGCACTTGAT TTCTACTACA ACGAATCCAA TGCTTGA 

 

Protein sequence

MIAIKAVTKV YHTRQGPRVV LDQIDLNVQR GEKIGILGRN GAGKSTLIRM ISGAEFPTSG 
DIERNMTISW PLAFGGAFQG SLTGYDNLRF ICRIYGVDFT KVAPYVDDFS ELGMYLREPV 
KKYSSGMRAR LAFAISLAVD FDCFLIDEIV AVGDARFHAK CHNELFEKRK DRAMIIVSHD 
AGYMREHCDR AAVLVSGKLH NFDTVDNALD FYYNESNA