Gene Bcen_0285 details

Gene Information

• Locus tag: Bcen_0285
• ID: 4092386
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: -
• Start bp: 312418
• End bp: 314346
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 638013544
• Product: capsule polysaccharide biosynthesis
• Protein accession: YP_620171
• Protein GI: 107021844
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3563] Capsule polysaccharide export protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.812993
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGTAT CGACACGCCG ACGGCGGCTT GCCTACTCGC CCCTTCACTG GGCAATTGCG 
CCAGCACGAA CGACAGTTTG GCCAGGGCCG CTCGCCGCTC GCCCATCCAC TTCCGCAGCG 
TTGCTTTCTT GGTTTGAAGC ACCCGCCGGG ATCCCGCCAT CGAACGCGCT GATTAGTTCC 
GTCGACGGAA TGCTCCGCTC GGAAACGCGA CTCGGTGAAT CGGAACGGAT CGCAGCCCTG 
ATGTCTCGCG TACTCGAGAG CGACGCGCTA CACCTGCGCA TGCGAATCGC TCCGTTGCCA 
AGCGCGCTGG CTGTCGCAGA CAGAAAACAC ATCGTCATCA TCGACGAACG GACCCGCTCC 
GAAATTGACG CGGGCGTACC TGCGCGCGAA AGGTTTCGTC AGTTCTCCGC AATGCTCCAA 
CATCTCGCAG AATTTCGGTC AGACGCGCAG ATCTGGATTC TGCGTAGTAA CGATCCTGGA 
AGAGGCGCGT GGCTGTCTAA ACGAGTACGA TTGCCCCATA ACGTGCAGCG CCTCTCCGGT 
GCGAGCTCAC TTCGCGAAAT CCTTCGACAC GTCACCGAAA TGTATACGGT TGCCGCGTCT 
GAAGGCATGG CTGCATTGCT CACCGGCATA CCCGTCTATG TGTTCGGCGC CCCCTATTAC 
GCAGGCTGGG GACTCACAAC CGATGCGCAG CCACTGACCG ACCGTCACGC GCGCCCCACA 
GTCGCCGCCC TGTTCGAAGC GGTCTTTTGC CGCTCGGCCC GCTACCTCGA CCTCGAGACA 
TATACAGTTG GCACAATCGA CGCCCTTCTC GACGCCGTCG AAGTACAGCA TGCGGTTGCG 
CACCGTTTCG CCGATCTGCA GCGCGTTGCC GGCATCCAAT TTCAATGGTG GAAGCGCCCT 
TTTGCAACGC CGTATTTGAA TGCTGGTGGA GGTCGCCTGC GCTGGAGTAC ACATCCTGTC 
AAGGTTCGCA CCGACGAACA TGCGGCTTTA TGGGGCGCAC GCGACGCGAC AGCACTGCCT 
TCCACTGCAC AGCGGCTGAG GATAGAGGAC GGCTTCATCC ATTCCTCTGG CCTGGGCTCC 
GACATGTCTG CACCACGCAG TCAGGTCATC GATCGGCGCG GACTCTATTT CGACGCCAGC 
GCGCCCAGCG ATCTATCGAC ACTGCTCAAC ACAATAGATT TCCCCCCAGC GGAGCTAGCA 
CGCGCCGCGG CACTACGAAG CCGGATCGTC GCGGCCGGCA TCACCAAATA CAACCTCGGG 
CGCAAAGCGC CTACCTGGCT GGCGCCCGTC AATCAAAAGG TCGTGCTTGT TGTTGGTCAA 
GTCGCCGATG ACGCATCAAT CCGGCTCGGC ACGCGCGGCA TCGACAACCT CGACGCACTG 
CTGCGCCGCG TACGCGAGCG TCTCCCCGAC GCATTCATCG TGTATAAGCC CCATCCGGAT 
GTGCTGTCCG GAAACCGGAA CGGCCTCATC AACGCAGCCC AGTTGGCAAA CATCGTCGAT 
TCCGAGTCGG ACATGATCTC GCTGATCGAG GCTGTCGATG AAGTACACAC ACTCTCGTCC 
CTCGCGGGAT TCGACGCGTT GCTGCGCGGC AAGAACGTCA GCACCTACGG GCTACCGTTT 
TATGCTGGCT GGGGCCTGAC CGACGACGAC CTCGCGCCAC TTCCGTGGCG AGAGCGCACG 
TTGTCGCTCG ACATGCTGGT AGCGGGCACT CTATTGCGCT ATCCGCTTTA CTGGGACTGG 
CAACTCCAAC TCTTCACAAC CCCGGAAGCA GTCGTTGGTC AGTTGTCGGA GGCCGCTGCA 
CGTCCGTTGA AAACCGTCGC TCAAGACCGC TTGCGCCCAT ACGTGAAAGC ATTGCGCTGG 
ACGCGCAATG TCGTGCGCCA TCTCGTTTGG CGTTACCGGC AGAACTCGGC AGACCGCGAT 
CAGGCGTAG 

 

Protein sequence

MNVSTRRRRL AYSPLHWAIA PARTTVWPGP LAARPSTSAA LLSWFEAPAG IPPSNALISS 
VDGMLRSETR LGESERIAAL MSRVLESDAL HLRMRIAPLP SALAVADRKH IVIIDERTRS 
EIDAGVPARE RFRQFSAMLQ HLAEFRSDAQ IWILRSNDPG RGAWLSKRVR LPHNVQRLSG 
ASSLREILRH VTEMYTVAAS EGMAALLTGI PVYVFGAPYY AGWGLTTDAQ PLTDRHARPT 
VAALFEAVFC RSARYLDLET YTVGTIDALL DAVEVQHAVA HRFADLQRVA GIQFQWWKRP 
FATPYLNAGG GRLRWSTHPV KVRTDEHAAL WGARDATALP STAQRLRIED GFIHSSGLGS 
DMSAPRSQVI DRRGLYFDAS APSDLSTLLN TIDFPPAELA RAAALRSRIV AAGITKYNLG 
RKAPTWLAPV NQKVVLVVGQ VADDASIRLG TRGIDNLDAL LRRVRERLPD AFIVYKPHPD 
VLSGNRNGLI NAAQLANIVD SESDMISLIE AVDEVHTLSS LAGFDALLRG KNVSTYGLPF 
YAGWGLTDDD LAPLPWRERT LSLDMLVAGT LLRYPLYWDW QLQLFTTPEA VVGQLSEAAA 
RPLKTVAQDR LRPYVKALRW TRNVVRHLVW RYRQNSADRD QA