Gene Bcen_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0257 
Symbol 
ID4090864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp277923 
End bp282122 
Gene Length4200 bp 
Protein Length1399 aa 
Translation table11 
GC content71% 
IMG OID638013517 
Producthypothetical protein 
Protein accessionYP_620144 
Protein GI107021817 
COG category[S] Function unknown 
COG ID[COG3164] Predicted membrane protein 
TIGRFAM ID[TIGR02099] conserved hypothetical protein TIGR02099 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.866424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACC GTCAGGAATC CGCCGTAGCT GCGCCCGAAG CGGGACCTCC GAAGCACGAT 
CATCCGGTCC TGCGTCGCGT GTTCAGGGTG ACGCTGGCAG TCGGCATCGG CACCTACTTC
ATCGCGTCCG GCGCCTTCCT CGGGCTGCGC TACGTGGTGC TGCCCCGCAT CGACGAATTC
CGCCCGCGCA TCGAGCGCGC CGTGTCCGAC AAGCTCCACG CCCAGCTTTC GATCGGCAAG
CTTTCCCCGA ACTGGTCCGG CATGCAGCCG GGCGTCGAAC TCACGAACCT GACGATCCGC
GGCCGTGACG GCAAGGTCGC GCTGTCGGTG CCGCACGCGA CGGCCGCGCT GTCGTGGATG
TCGCTGCTGC GGCTGTCGCC CGCGCTGTCG AGCCTGATCG TCGACCAGCC CGATCTCGTG
GTCGCGCGGG CGGCCGACGG CTCGCTGAGC GTCGCGGGCG TCGGCGTCGC CACCACCCAC
GGCGGCAACG ACACGTTCGG CACCTGGCTG CTGAAACAGG AGGCGGTCGT GCTGCGCGGC
GGCACGCTGC GCTGGCGCGA CGCGCAGCAC GCCGCGCCGG AGCTCGTGCT GTCCGGCATC
CGGATCGCGG TGCTCAACGA CGGCCGCGTG CACAAGGCGG CGCTGCAGGC GCCGGCCAAC
GGCACGCTGC TGCTCGGCCC GCTCGATTTC CGCGCACGCT TCAAACACAA GCCGCTCGCG
CCGATCGGCA AGCCGGCGAA CTGGACCGGC GACGCCTACC TGTCGACCGG CCCCGTCGAC
CTGCAGACGC TCACGCGCTA TCTCGACGTG CCGCTCACGA TCCATGCGGG CCGGATCGAC
AACGCGATCT GGGCGACCTT CGGCGACGGC CACCTGCGCT CGGCGGGCGG CGACCTGCAA
GGCGCCGACG TCGCGCTGCG CGTGCGTCCG ACGCAGCCGC GGCTCGACGT GCCGACGGTC
GGCTTCGGCT GGGACATGGT GCTCGATGCG GGCCACGACT ACACGCTGCA CCTGACCCGC
TTCAATGCGG AACTCGGCCA GCCGCCGCTG CCGGACGGCA CGCCGCTCGC CCGCTCGCTC
GCGCTGTCGA CGCTGACGGC GCGCTACCGC GTGCCGACCG CGAACCAGGG GCAACTGCTC
AGCGTGGTCG GCGACCGCGT CGATCTCGGC ATCCTCAGCG AATTCATCCG CGGGCTGCCG
CTGCCGGCGC GCCTGCGCAA CGAGCTGATC AAGATCGACC CGCGCGGGAT GGTGTCGAAC
TATCACATCG AGGTCGAGCG CGCGAAACCC GCGCACCCCG ATCTCGCCGA CGAGGAGCGG
CGCATGGGCG CCGCGCCGAT CGTCCGCTAC CGCTTCCTCG GCGATCTGCA AGGCATCAGC
TTCGCCGCGC AGGAGCCGCC GCCCGGGCTC TCGCCGCGCG GTCACCCGCG CGCCGGCTGG
CCGGGCGTCG AGAACCTGTG GGGCCGCGTC GATGCGAACG AGACGGGCGG CTCCGCGCAT
ATCGACACCG TCAAAGCGGC GGTCACCGTG CCCGGCGAAT TCGACGAGCC GCGCCTGACG
TTCGACCGGT TGCGCGGCAA CGCCAAATGG ACGATCACGC CCGCGCCCGG CGACAAGCAT
GCGCGCGTCG ACGTGTCGCT GCCCGACCTG CTCGTGTCGA ATCCCGATGC CGAAATCGCG
GTGTCGGGCT CGTACACGAA CCCGGGCCAC GGCCGCGGCA CGCTCGACCT GCGCGCCGAT
TTCGCCCGCG CGTCGGTCGC GCGCATTCCG CGCTACCTGC CGACCGGGAT GTCCGAGCAC
CTGCGCGACT ATCTCGGCCA CGCATTGCAG GACGGCACCG TGAGCAAGGG CGCGTCGATC
GTCGCGCGCG GCCCGCTCGA GAAATTCCCG TTCGAACACG AGCCGGACGC CGGCGCGTTC
CATATCGTCG CGCCGTTCAC CGGCGGCCGC TTCGAGCCGA CGCCATACCC GCCGCGCAAG
CTCGCGAACG GCACGCCGAG CGTCTGGCCG GCGCTCGACG GGATCGACGG CGTGTTCGAG
CTCGCGCAGA ACAAGCTGCG TTTCGACATC CAGCGCGCGC ACTACAAGCG CGTCGCGCTG
ACGAAGGTCG CGGGCCGCAT CGACGACCTC GGCAATCCGT CGCACTCGCC GCTGATCATC
GACGGCCATG CGCAGGGCCC GCTCACCGAC CTGATCGACT ACGCGGACAA CAGCTCGCTC
GGCACGATGA GCAACCATAT CGGCCAGCGG ATCGACGCCC AGGGCCCCGC GTCGCTCGCG
CTCAAGATCA CGATTCCACA GCACGTCCCC CACCCGCACA CGCACGTCGA AGGCGCGCTC
GCGTTCGGCG GCAACACGCT GTCGACGAGC GGCGTGCCGC CGCTGTCGGC CCTGCGCGGC
AGCGTGCGCT TCACCGAGGC CGGCGCGTCG CTGCACGACC TGTCGGGACG CTTCCTCGGC
GGCCCGGTGC GCGCGAACGG CAGCTTCCGG TCGCACGGCC CGTACGCGGT GGACGTCGAC
GGCCGGCTCG CGCTCGACGC CGCCCGCGGC CTGAACCTGC ACGGCGCGGC CGCCGCGCTG
CTCGAGCACG TGGTCGGCGA CGCACCGTAC AAGGTCGCGG TGCGCGGCGC GCCGGGCCGC
CTGCCCGACG TGAGCGCGCA ATCCGACCTG ACGGGCGTCG CGCTGAACTT CCCGGCGCCG
TTCGCGAAAC CGGCCGGCAC GCCGATGCCG TTCCGCTTCA CGCTGCAGCC GGCGCCGCAG
GTGGACGGCA AACGCCTCGA ACATGCCGAC CTGACGCTCG GCCCGGTGAC CGCGACCTAC
CTGCTCGACG CGACGCGCGG CCAGCCGCTG CGCGCGGTAC GCGGCGCGAT GGGCATCCAC
CGGATGCCCG ACATGCCGCA GGACGGCGTG AGCGCGGCCG TCGACGTCGC CGAGCTGGAC
GCCGACGCAT GGCTCGCCCT CGCCCACACG TTGAAGCCCG ACACGCCGCG CGCGCCGGAA
CCGCAGGCGG CACCGCGCGT CGATTTCGCG AGCTTCGCGC CGAAGCGCTT CGCGTTCCAT
TTCGGCACGC TGAAGCTGCT CAAGCGCAAC TGGGAGAACG TGATCGTCGG TGCGTCGCAC
GTCGACGACC TCTGGCAGGC GAACATCGCG TCGAACCAGG TCTCGGGCTA CCTGTCGTGG
GCGCCGGGCG GCGGTCACAA CGGCGCGGGC GTACTGAACG CGCGGCTCGC GAAGCTGGTC
GTGCCGCAAA GTTCGCAGCA CGACCTCGTC GGCCGCGCGA TGAACCTGCC GACGCCGACC
GACCGCCCGA TGCCGTCGAT CGACCTGATC GTCGACCAGG TCGTCGCGCG CGATCACGAC
ATCGGCCGGC TCGTCGTCAA CGCGCGCAAC ATCGACGAAG ACGGCACGCC CGTGTGGCAA
CTCGACAAGC TGGAACTGGC GAACCCGGCC GCGAAGCTCA CGGCGACCGG CAACTGGCGC
ACCTCGCGCC GCGCGCTGGC CCGCGGCGCC GACGAAAACG ACGCGCCGCG CCGCACCGTG
TTCGACTTCA AGCTCGACAT CGACAATGCG GGCGCGCTGC TCGACCGCGT CGGCCTGCCG
CGCACGCTCG CGGACGGTCA CGGCTCGGTC ACGGGCAAGG TCGGCTGGCG CGGCGGCCCG
ACCGCGGTCG ACTTCCCGTC GCTCGGCGGC CAGGTCGCGC TCGATCTCGA ACACGGGAAG
ATCCTGAAGG TCGACCCCGG CGCGGCGAAA CTGCTCGGCG TGCTGAGCCT GCAGAGCCTC
GCGCGCTTCC TGACGCTGAA TTTCCGCGAC GTGGTCGGCA AGGGGCTGCC GTTCGACAAG
ATCACCGGTA CCGGCCGGAT TTCGAACGGG ATCGCACGCA CCGACGACTT CTCGATGATG
ACGGGCCCCG CGAACGTCAC CGTGCGCGGC GCGGTCGATC TCGGCACCGA AACGCAGGAC
CTGCATGCGC ACGTCGCGCC CAAAATCAGC GCGGGCGCCG CCGCGATCGG GGCGGCCATC
ATCAACCCGC TGCTCGGCGT CGGCGTGCTG GCCGCGAACT ACGCGCTGTC CCAGACGCTG
TCGCGCGCGT TCGCGCTCGA CTACGCGATC ACCGGCTCAT GGGCGCACCC GCATATCGAG
CGAGTGGGAA GCGATCAGGG TAAGATGAAT CACGGTCCGG CCGATGCCTC GAGCCATTGA
 
Protein sequence
MSDRQESAVA APEAGPPKHD HPVLRRVFRV TLAVGIGTYF IASGAFLGLR YVVLPRIDEF 
RPRIERAVSD KLHAQLSIGK LSPNWSGMQP GVELTNLTIR GRDGKVALSV PHATAALSWM
SLLRLSPALS SLIVDQPDLV VARAADGSLS VAGVGVATTH GGNDTFGTWL LKQEAVVLRG
GTLRWRDAQH AAPELVLSGI RIAVLNDGRV HKAALQAPAN GTLLLGPLDF RARFKHKPLA
PIGKPANWTG DAYLSTGPVD LQTLTRYLDV PLTIHAGRID NAIWATFGDG HLRSAGGDLQ
GADVALRVRP TQPRLDVPTV GFGWDMVLDA GHDYTLHLTR FNAELGQPPL PDGTPLARSL
ALSTLTARYR VPTANQGQLL SVVGDRVDLG ILSEFIRGLP LPARLRNELI KIDPRGMVSN
YHIEVERAKP AHPDLADEER RMGAAPIVRY RFLGDLQGIS FAAQEPPPGL SPRGHPRAGW
PGVENLWGRV DANETGGSAH IDTVKAAVTV PGEFDEPRLT FDRLRGNAKW TITPAPGDKH
ARVDVSLPDL LVSNPDAEIA VSGSYTNPGH GRGTLDLRAD FARASVARIP RYLPTGMSEH
LRDYLGHALQ DGTVSKGASI VARGPLEKFP FEHEPDAGAF HIVAPFTGGR FEPTPYPPRK
LANGTPSVWP ALDGIDGVFE LAQNKLRFDI QRAHYKRVAL TKVAGRIDDL GNPSHSPLII
DGHAQGPLTD LIDYADNSSL GTMSNHIGQR IDAQGPASLA LKITIPQHVP HPHTHVEGAL
AFGGNTLSTS GVPPLSALRG SVRFTEAGAS LHDLSGRFLG GPVRANGSFR SHGPYAVDVD
GRLALDAARG LNLHGAAAAL LEHVVGDAPY KVAVRGAPGR LPDVSAQSDL TGVALNFPAP
FAKPAGTPMP FRFTLQPAPQ VDGKRLEHAD LTLGPVTATY LLDATRGQPL RAVRGAMGIH
RMPDMPQDGV SAAVDVAELD ADAWLALAHT LKPDTPRAPE PQAAPRVDFA SFAPKRFAFH
FGTLKLLKRN WENVIVGASH VDDLWQANIA SNQVSGYLSW APGGGHNGAG VLNARLAKLV
VPQSSQHDLV GRAMNLPTPT DRPMPSIDLI VDQVVARDHD IGRLVVNARN IDEDGTPVWQ
LDKLELANPA AKLTATGNWR TSRRALARGA DENDAPRRTV FDFKLDIDNA GALLDRVGLP
RTLADGHGSV TGKVGWRGGP TAVDFPSLGG QVALDLEHGK ILKVDPGAAK LLGVLSLQSL
ARFLTLNFRD VVGKGLPFDK ITGTGRISNG IARTDDFSMM TGPANVTVRG AVDLGTETQD
LHAHVAPKIS AGAAAIGAAI INPLLGVGVL AANYALSQTL SRAFALDYAI TGSWAHPHIE
RVGSDQGKMN HGPADASSH