Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0248 |
Symbol | glcF |
ID | 4090855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 266493 |
End bp | 267719 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638013508 |
Product | glycolate oxidase iron-sulfur subunit |
Protein accession | YP_620135 |
Protein GI | 107021808 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0932552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACGA ATCTCGCCGA TTTCATCCGC AATACGCCCG ACGGCGACGA GGCCGACGCG ATCCTGCGCA AGTGCGTGCA CTGCGGGTTC TGCACCGCGA CCTGCCCGAC CTATCAACTG CTCGGCGACG AACTCGACGG CCCGCGCGGC CGCATCTACC TGATCAAGCA GATGGTCGAA GGCGCACCCG TCACGCGCAG CACGCAACAG CATCTCGACC GCTGCCTCAC GTGCCGCAGT TGCGAGACGA CCTGCCCGTC CGGCGTCCAG TACGGCCGGC TCGTCGAGAT CGGGCGCAAG CACGTCGAGG CGCAGGTGGA ACGCCCCGCG CAGCAGCGGC TGATGCGCCG CGTGCTCGCG AGCGTCGTGC CGAACGCGGC GCTGTTCTCG CCGATGATGC GGCTCGGCCA GCACGTGCGG CCGCTGCTGC CGAAGCGGCT GCGCGACAAG GTGCCGCCGC GCACGCGGCT GCTCGAATGG CCGCACCGCA CGCATCCGCG CAAGATGCTG ATGCTCGGCG GCTGCGTGCA GCCGTCGATG CTGCCGAACA TCAACATCGC GACCGCGCGC GTGCTCGACG CGCTCGGCAT CGAGACGGTC GTCGCGCCCG ACGCGGGCTG CTGCGGCGCG ATCCGCCTGC ACCTGAACTA TCACGACGAA GCGCTCGACG ACGCGCGCCG CAACATCGAC GCGTGGTGGC CCCACGTCGA ACAGGGCGTC GAGGCGATCG TGATGAACGC GTCGGGCTGC GGCGCGACGG TGCTCGAATA CGCGCACCTG CTGCGCGACG ATCCGGCCTA CGCGGAGAAG GCGCAGCGCA TCGTGTCGCT GACGCGCGAC GTCTCCGACG TGCTGCTCGC GTTCGAGGCC GAACTCGCGA CGATCGCGCG GCGCCGCGCG ATCCATACGG TTGCCTATCA CCCGCCGTGC ACGCTGCAGC ACGGCCAGCA GTCGCGCGGC AAGGTCGAGC GCCTGCTGGA GACGCTCGGC ATCGACGTGC GGCTGCCGGC CGACAGCCAC CTGTGCTGCG GCTCGGCCGG CACCTACTCG CTGACGCAGC CGTCGCTGTC GTACCGGTTG CGCAAGCAGA AGCTGCTGAA GCTGCAGGCG CTCGAGCCGC AGATGATCGT GTCCGGCAAC ATCGGCTGCA TCGCGCATCT GCAAAGCGGC ACGCAGGTGC CGGTCGCCCA CTGGGTCCAG CTCGTCGAGC ATTTGCTGTA CGGCTAG
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Protein sequence | MQTNLADFIR NTPDGDEADA ILRKCVHCGF CTATCPTYQL LGDELDGPRG RIYLIKQMVE GAPVTRSTQQ HLDRCLTCRS CETTCPSGVQ YGRLVEIGRK HVEAQVERPA QQRLMRRVLA SVVPNAALFS PMMRLGQHVR PLLPKRLRDK VPPRTRLLEW PHRTHPRKML MLGGCVQPSM LPNINIATAR VLDALGIETV VAPDAGCCGA IRLHLNYHDE ALDDARRNID AWWPHVEQGV EAIVMNASGC GATVLEYAHL LRDDPAYAEK AQRIVSLTRD VSDVLLAFEA ELATIARRRA IHTVAYHPPC TLQHGQQSRG KVERLLETLG IDVRLPADSH LCCGSAGTYS LTQPSLSYRL RKQKLLKLQA LEPQMIVSGN IGCIAHLQSG TQVPVAHWVQ LVEHLLYG
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