| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0235 |
|---|
| Symbol | secF |
|---|
| ID | 4090842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 250255 |
|---|
| End bp | 251205 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638013495 |
|---|
| Product | preprotein translocase subunit SecF |
|---|
| Protein accession | YP_620122 |
|---|
| Protein GI | 107021795 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC GGCACGCGCT GGTGTTCAAC
GTGATCTCGC TGGTCACGTT CCTCGCCGCC GTGTTCTTCC TGTTCCACCG CGGGCTGCAC
CTGTCCGTCG AATTCACCGG CGGGACGGTG ATCGAGGTCC AGTACCAGCA GGCCGCGGAG
CTCGAACCCG TGCGCGCGAC GCTCGGCAAG CTCGGCTATG CCGACGCGCA GGTGCAGAAC
TTCGGCACGT CGCGCAACGT ACTGATCCGC CTGCAGCTGA AGGAAGGCCT CACGTCCGCG
CAGCAGAGCG ACCAGGTGAT GGGCGCGCTG AAGGCGCAGA GCCCGGACGT CACGCTGCAG
CGCGTCGAGT TCGTCGGCCC GCAGGTCGGC CGCGAGCTCG CGACCGACGG TCTGCTCGCG
CTCGCGTGCG TCGTGATCGG CATCGTGATC TACCTGTCGT TCCGCTTCGA ATGGAAGTAC
GCGGTGGCGG GCATCATCGC CAACCTGCAC GACGTCGTGA TCATTCTCGG CTTCTTCGCG
TTCTTCCAGT GGGAATTCTC GCTGGCGGTG CTCGCGGCGA TCCTCGCGGT GCTCGGCTAC
TCGGTCAACG AGTCGGTCGT CATCTTCGAC CGGATCCGCG AGACGTTCCG CCGCGAACGC
AAGATGAGCG TGCAGGAAGT GATCAACCAC GCGATCACGA CCACGATGTC GCGCACGATC
ATCACGCACA CGTCGACGGA AATGATGGTG CTGTCGATGT TCTTCTTCGG CGGCCCGACG
CTGCACTACT TCGCGCTCGC GCTGACGGTC GGCATCATGT TCGGCATCTA CTCGTCGGTG
TTCGTCGCGG GCTCGCTCGC GATGTGGCTC GGCATCAAGC GCGAAGACCT GGTCAAGGAA
AAGAAGACCG CGCACGATCC GGACGATCCG AACGCCGGCG CGCAGGTTTA A
|
|---|
| Protein sequence | MEFFRIRKDI PFMRHALVFN VISLVTFLAA VFFLFHRGLH LSVEFTGGTV IEVQYQQAAE
LEPVRATLGK LGYADAQVQN FGTSRNVLIR LQLKEGLTSA QQSDQVMGAL KAQSPDVTLQ
RVEFVGPQVG RELATDGLLA LACVVIGIVI YLSFRFEWKY AVAGIIANLH DVVIILGFFA
FFQWEFSLAV LAAILAVLGY SVNESVVIFD RIRETFRRER KMSVQEVINH AITTTMSRTI
ITHTSTEMMV LSMFFFGGPT LHYFALALTV GIMFGIYSSV FVAGSLAMWL GIKREDLVKE
KKTAHDPDDP NAGAQV
|
|---|
| |