Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0188 |
Symbol | |
ID | 4091834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 197848 |
End bp | 198525 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638013448 |
Product | amino acid ABC transporter permease |
Protein accession | YP_620075 |
Protein GI | 107021748 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCAGT TCGACTGGAG TAGTATTCCC GGCGCGCTGC CGACGCTGTG GTCGGGGGCG GTCGTCACGT TCAAGATCAC GCTGATCGCG ATCGTGATCG GGATCGTCTG GGGCACGCTG CTGGCGCTGC TGCGGCTGTC CGGCGTGAAG CCGCTCGCAT GGTTCGCGAA AGCGTACGTG ACGGTGTTCC GCTCGATCCC GCTCGTGATG GTGCTGCTGT GGTTCTTCCT GATCGTGCCG CAGTTGCTGC AGGGCGTGCT CGGGCTGTCG CCGACGATCG ACATCCGCCT CGCGTCGGCC ATGGTCGCGT TCTCGTTGTT CGAAGCCGCG TATTATTCCG AGATCATCCG CGCCGGCATC CAGGCGGTGC CGCGCGGGCA GGTGAACGCC GCGTTCGCGC TCGGCATGAA CTACGCGCAG GCGATGCGCC TCGTGATCCT GCCGCAGGCC TTCCGTGCGA TGGTGCCGCT GCTGCTCACG CAGGCGATCG TCCTGTTCCA GGATACGTCG CTCGTGTACG TGATCAGTCT CGCGGACTTC TTCCGCACGG CCGCCAACGT CGGCGATCGC GACGGCACGA CCGTCGAGAT GGTCCTGTTC GCCGGCGCAT GCTATTTCGT GATTTGCTCG TTGGCGTCTG CTCTCGTCAA GGGTCTCCAG AAAAAGGTCA CAAGATGA
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Protein sequence | MHQFDWSSIP GALPTLWSGA VVTFKITLIA IVIGIVWGTL LALLRLSGVK PLAWFAKAYV TVFRSIPLVM VLLWFFLIVP QLLQGVLGLS PTIDIRLASA MVAFSLFEAA YYSEIIRAGI QAVPRGQVNA AFALGMNYAQ AMRLVILPQA FRAMVPLLLT QAIVLFQDTS LVYVISLADF FRTAANVGDR DGTTVEMVLF AGACYFVICS LASALVKGLQ KKVTR
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