Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0187 |
Symbol | |
ID | 4091833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 197108 |
End bp | 197848 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638013447 |
Product | amino acid ABC transporter permease |
Protein accession | YP_620074 |
Protein GI | 107021747 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTACC ACTGGAACTG GGGCATCTTT CTGAGCCCCG TGTCGACCGG CGAGCCGACG ACTTATTTCG GATGGCTGAT GTCCGGCTTC TGGGTGACGA TCGAAGTGTC GCTCGTCGCC TGGGTCATCG CGCTGATCGT CGGGTCGCTG TTCGGCGTGC TGCGCACCGT GCCGAACAAG TGGCTCGCCG CGATCGGCAC CGTGTACGTG TCGATCTTCC GGAACATCCC GCTGATCGTG CAGTTCTTCG TCTGGTATCT CGTGATACCC GAGTTGCTGC CTGCGTCGAT CGGCACCTGG ATCAAGCAGT TGCCGCCCGG CACGCAGTTC TTTACCGCGT CGATCGTCTG TCTCGGCCTG TTCACGGGCG CGCGCGTGTG CGAACAGGTG CGCTCGGGGA TCAACGCGCT GCCGAAGGGC CAGCGCGCGG CCGGCCTCGC GATGGGCTTC ACGCAATGGC AGACGTATCG CTACGTACTG CTGCCCGTCG CGTACCGGAT CATCGTGCCG CCGCTCACGT CGGAATTCCT GAACATCTTC AAGAACTCCG CCGTCGCATC GACGATCGGC CTGCTCGACC TGTCCGCACA GGCGCGCCAG CTCGTCGACT ACACCGCGCA GACCTACGAG TCGTTCATCG CGGTCACGCT CGCCTACGTG CTGATCAACC TCGTCGTGAT GGCGTTCATG CGCTGGATCG AAGGCCGCAC GCGGCTGCCC GGCTATATCG GAGGCAAGTG A
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Protein sequence | MSYHWNWGIF LSPVSTGEPT TYFGWLMSGF WVTIEVSLVA WVIALIVGSL FGVLRTVPNK WLAAIGTVYV SIFRNIPLIV QFFVWYLVIP ELLPASIGTW IKQLPPGTQF FTASIVCLGL FTGARVCEQV RSGINALPKG QRAAGLAMGF TQWQTYRYVL LPVAYRIIVP PLTSEFLNIF KNSAVASTIG LLDLSAQARQ LVDYTAQTYE SFIAVTLAYV LINLVVMAFM RWIEGRTRLP GYIGGK
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