Gene Bcen_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0186 
Symbol 
ID4091832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp196130 
End bp197023 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content61% 
IMG OID638013446 
Productextracellular solute-binding protein 
Protein accessionYP_620073 
Protein GI107021746 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.947811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACC ACAAGGCAGT CCTGATGGCC GCAGCGCTGT GCGCGTTCGC AAGCGGCGCG 
TACGCTCAGG AGACTGGCAC GCTGAAGAAG ATCAAGGACA CGGGCGTGAT CGCGCTGGGC
CACCGCGAAT CGTCGATTCC GTTCTCCTAC TACGACCAGA ACCAGCAGGT GGTCGGCTAT
TCGCGCGAGT TCCAGCTGAA GATCGTGGAC GCGGTGAAGA AGAAGCTGAA CCTGCCGAAC
CTGCAGGTGA AGAACATCCC CGTCACGTCG CAGAACCGCA TTCCGCTGGT GCAGAACGGC
ACGGTCGACA TCGAGTGCGG CTCGACGACC AACAACCTCG AACGTCAGCA GCAGGCCGCG
TTCTCCGACA CGATCTTCGT GATCGGCACG CGCCTGATGA CGAAGAAGGA TTCGGGCGTC
AAGGATTTCG CCGACCTGAA GGGCAAGACG GTCGTGACGA CCGCCGGCAC GACGTCGGAG
CGTCTGCTGC GCAAGATGAA CAACGACAAG CAGCTCGGCA TGAACATCAT CAGCGCGAAG
GATCACGGCG ATTCGTTCAA CACGCTGGAA TCGGGCCGCG CGGTCGCGTT CATGATGGAC
GACGCGCTGC TCGCGGGCGA GCGCGCGAAG GCGAAGCAGC CGGGCGAGTG GGTGATCGTC
GGCACGCCGC AATCGGAAGA GGCTTACGGC TGCATGATGC GCAAGGGTGA CGCCGACTTC
AAGAAGGTCG TCGACGACGC GATCTCGCAA GTCGAGAAGT CGGGCGAAGC CGCGAAGATC
TACGCGAAGT GGTTCGAGAA CCCGATTCCG CCGAAGGGGC TGAACCTGAA CTTCCCGCTG
TCCGATTCGA TGAAGAAGCT GTACGCGAAC CCGAACGACA AGGCGCTCGA CTGA
 
Protein sequence
MKYHKAVLMA AALCAFASGA YAQETGTLKK IKDTGVIALG HRESSIPFSY YDQNQQVVGY 
SREFQLKIVD AVKKKLNLPN LQVKNIPVTS QNRIPLVQNG TVDIECGSTT NNLERQQQAA
FSDTIFVIGT RLMTKKDSGV KDFADLKGKT VVTTAGTTSE RLLRKMNNDK QLGMNIISAK
DHGDSFNTLE SGRAVAFMMD DALLAGERAK AKQPGEWVIV GTPQSEEAYG CMMRKGDADF
KKVVDDAISQ VEKSGEAAKI YAKWFENPIP PKGLNLNFPL SDSMKKLYAN PNDKALD