Gene Bcen_0173 details

Gene Information

• Locus tag: Bcen_0173
• Symbol: holA
• ID: 4091819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: +
• Start bp: 180343
• End bp: 181437
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638013433
• Product: DNA polymerase III subunit delta
• Protein accession: YP_620060
• Protein GI: 107021733
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1466] DNA polymerase III, delta subunit
• TIGRFAM ID: [TIGR01128] DNA polymerase III, delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATTGC GACTTGATGC GCTGGAGCCG CACCTCGCGA AGGGGTTGGC CGGGCTCTAT 
ACCGTGTACG GCGACGAGCC GCTGCTCGCG CAGGAAGCGT GCGACCGCAT TCGTGCGGCC 
GCGCGCGCGG CCGGCTTTAC CGAGCGTTCG GTGCATACGG TCGAGCGCGG CTTCGACTGG 
AGCGTGCTGC TCGGCGCGAC CCAGGCGATG TCGCTGTTCG GCGAACGTCA GCTGATCGAA 
CTGCGCATTC CGTCGGGCAA GCCCGGCAAG GAAGGCGCCG ACGCGTTGAA GACGCTTGCG 
GCCACACCCA ATCCCGACGC GCTGATGCTC GTCACGTTGC CGCGCCTCGA CGCGGCCACG 
CAGAAATCCG CGTGGTTCAC CGCGCTGCAG AACGGCGGCG TCGCGCTGAA GATCGATCCG 
GTCGATCGCG CGCAACTGCC GAACTGGATC GGCCAGCGCC TGTCGATGCA GGGCCAGCGC 
GTCGCACCCG GCGACGACGG GCGCCGCGCG CTGCAGTTCA TCGCGGAGCG CGTCGAGGGC 
AACCTGCTCG CCGCGCACCA GGAAATCCAG AAGCTCGGGC TGCTGTATCC GCAGGGCGCG 
CTGTCGTTCG AGCAGGTGCA CGACGCGGTG CTGAACGTCG CGCGCTACGA CGTGTTCAAG 
CTGAACGAAG CGATGCTCGC CGGCGACGCC GCGCGGCTCG CGCGGATGAT CGACGGGCTG 
AAGGGCGAGG GCGAGGCGAT CGTGCTCGTG ATGTGGGCCG TCGTCGAGGA ATTGCGCACG 
CTGCTGCGGA TCAAGCGCGG CACGACGGCC GGCAAGCCGC TCGCGACGCT GCTGCGCGAG 
AACCGCGTGT GGGGGCCGCG CGAGCGGCTG ATCGCGCCCG CGCTGAACCG CGTGTCGGAA 
GCGGTGCTCG AAAAGGCGCT CGCATTCGCC GCGAAGCTCG ACCGGCAGGT CAAGGGCTTG 
TCCGCCGTCA CGCCGGGCCG CCGCACGCAG GACGAACCGC CACCCGACCC GTGGGACGGG 
CTGTTCCAGC TCGCGATGAC GGTCGCGGGC GCCCGCGGCG AACGACCGCC GACCGCGGGT 
CGCGTGCGAC GCTAA 

 

Protein sequence

MQLRLDALEP HLAKGLAGLY TVYGDEPLLA QEACDRIRAA ARAAGFTERS VHTVERGFDW 
SVLLGATQAM SLFGERQLIE LRIPSGKPGK EGADALKTLA ATPNPDALML VTLPRLDAAT 
QKSAWFTALQ NGGVALKIDP VDRAQLPNWI GQRLSMQGQR VAPGDDGRRA LQFIAERVEG 
NLLAAHQEIQ KLGLLYPQGA LSFEQVHDAV LNVARYDVFK LNEAMLAGDA ARLARMIDGL 
KGEGEAIVLV MWAVVEELRT LLRIKRGTTA GKPLATLLRE NRVWGPRERL IAPALNRVSE 
AVLEKALAFA AKLDRQVKGL SAVTPGRRTQ DEPPPDPWDG LFQLAMTVAG ARGERPPTAG 
RVRR