Gene Bcen_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0156 
Symbol 
ID4090820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp162878 
End bp163888 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID638013416 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_620043 
Protein GI107021716 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.196214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTC GCGTCGCAAT CAACGGCTAC GGCCGTATCG GCCGCAACAC GCTGCGCGCG 
TTCTATGAAA ACGGCAAGAA GCACGATCTC GAGATCGTCG CGATCAACGA CCTGGGCGAT 
GCGAAGACCA ACGCGCACCT GACCCAGTAC GACACCGCGC ACGGCAAGTT CCCGGGCGAA 
GTGTCGGTCG ACGGCGACTA CCTCGTCGTG AACGGCGACA AGATCCGCGT GCTGGCGAAC 
CGCAACCCGG CCGAACTGCC GTGGGGCGAG CTGGGCGTCG ACGTCGTGAT GGAATGCACG 
GGCTTCTTCA CGACGAAGGA AAAGGCGAGC GCGCACCTGA AGGGCGGCGC GAAGAAGGTG 
ATCATCTCGG CGCCGGGCGG CAAGGACGTC GACGCGACGA TCGTCTACGG CGTGAACCAC 
GACGTGCTGA AGGCCGAGCA CACGGTCATC TCGAACGCAT CGTGCACGAC GAACTGCCTC 
GCGCCGCTCG TCAAGCCGCT GAACGACAAG ATCGGCCTGG AAACCGGCCT GATGACGACG 
ATCCACGCGT ACACGAACGA CCAGGTGCTG ACGGACGTCT ATCACGAAGA CCTGCGCCGC 
GCGCGTTCGG CCACCCACAG CCAGATCCCG ACGAAGACGG GTGCCGCATC GGCCGTCGGC 
CTCGTGCTGC CGGAACTGAA CGGCAAGCTC GACGGCTACG CGATCCGCGT CCCGACGATC 
AACGTGTCGA TCGTCGACCT GTCGTTCATC GCGAAGCGCG ACACGACCGT CGAGGAAGTC 
AACGCGATCA TGAAGGAAGC ATCGGAAGGC GCGCTGAAGG GCATCCTCGG CTACAACGAC 
GCACCGCTGG TGTCGATCGA CTTCAACCAC AACCCGGCTT CGTCGACGTT CGACGCGACG 
CTGACCAAGG TGTCGGGCCG CCTCGTGAAG GTGTCGAGCT GGTACGACAA CGAGTGGGGT 
TTCTCGAACC GCATGCTGGA TACGGCAATC GCATTCGCGA ACGCGAAGTA A
 
Protein sequence
MTIRVAINGY GRIGRNTLRA FYENGKKHDL EIVAINDLGD AKTNAHLTQY DTAHGKFPGE 
VSVDGDYLVV NGDKIRVLAN RNPAELPWGE LGVDVVMECT GFFTTKEKAS AHLKGGAKKV 
IISAPGGKDV DATIVYGVNH DVLKAEHTVI SNASCTTNCL APLVKPLNDK IGLETGLMTT 
IHAYTNDQVL TDVYHEDLRR ARSATHSQIP TKTGAASAVG LVLPELNGKL DGYAIRVPTI 
NVSIVDLSFI AKRDTTVEEV NAIMKEASEG ALKGILGYND APLVSIDFNH NPASSTFDAT 
LTKVSGRLVK VSSWYDNEWG FSNRMLDTAI AFANAK