Gene Bcen_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0127 
Symbol 
ID4091351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp131229 
End bp132614 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content69% 
IMG OID638013387 
ProductUDP-N-acetylmuramate 
Protein accessionYP_620014 
Protein GI107021687 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATCC ACATTCTTGG CATCTGCGGC ACCTTCATGG GCGGTCTCGC CGTACTCGCA 
CGCGAGGCGG GCCACACGGT GACGGGTTGC GACGCGGGCG TCTATCCGCC GATGAGCACG
CAGCTCGAGG CGCAGGGCAT CACGCTGATC GAGGGCTACG GCGCCGAGCA GGTCGACCTG
AAGCCGGACC TGTTCGTGAT CGGCAACGTC GTCACGCGCG GCAATCCGCT GATGGAGGCG
ATTCTCGATC GCGGCCTGCC TTACGTGTCG GGCCCGCAGT GGCTCGGCGA GCACGTGCTG
GCCGGCAAAT GGGTGCTCGC GGTCGCGGGC ACGCACGGCA AGACGACCAC ATCGTCGATG
CTCGCGTGGC TGCTGGAAGA CGCAGGTCTC AATCCGGGCT TCCTGATCGG CGGCGTGCCG
CTGAACTTCG GCGTGTCCGC GCGGCTCACC GATTCGAGCT TCTTCGTGAT CGAGGCCGAC
GAGTACGACA CGGCATTCTT CGACAAGCGC TCGAAGTTCG TGCACTACCG GCTGCGCACC
GCGGTGCTGA ACAACCTCGA ATTCGATCAC GCCGACATCT TCCCCGATCT TGCCGCGATC
GAAACGCAAT TCCATCATCT GGTGCGCACC GTGCCCGGCG TCGGGCGGAT CGTCACGAAC
GGCCGCTCGG ACGCCCTCGA GCGCGTGCTG GCGCGCGGCT GCTGGAGCGA GGTCGAACGC
TTCGGCGTCG ACGGCGGCTG GCAGGCGCTG CCGGCCGAGG ACGGCGTGCC GGTCGACGAA
CGCTTCGCGG TGTATTCGCA TGCCGGGCGC GTCGGCGAAG TCGCATGGCA GGTGCAGGGC
GACCACAACC GGATGAACGC GCTCGCGGCG ATCGCCGCCG CGCGCCACGT CGGCGTGCCG
CCAGCGCAGG CGGCCGAATC GCTCGCCTCG TTCCGCAACG TGAAGCGCCG CATGGAAGTG
CGCGGCAGCG TGGACGGCGT GACCGTCTAT GACGACTTCG CGCACCATCC GACCGCGATC
GACACCACGA TCGCCGGCCT TCGTGCGCGC ATCGGCCGCC AGAATGCCCG CATCCTCGCC
GTGCTCGAGC CGCGCTCGAA CACGATGAAG CTCGGCGTGA TGAAGTCGCA GTTGCCGGCG
AGCCTCGCCG ATGCCGATCT CGTGTTCGGC TACGGCGCGC CGACCGGGCG CGATGCGCTC
GGCTGGAATC TCGCCGAAGC GCTCGCGCCG CTCGGCGACC GCGCACGCGC CTTCGACGAT
CTGCATCTGC TGGTGAAGGC GGTGGTCGAG GCCGCGCGTC CGGGCGATCA CGTGCTCGTG
ATGAGCAACG GCGGCTTCGG CGGCGTGCAC CAGAAGCTGC TCGATGCGCT CGGGAGCCGC
CCGTGA
 
Protein sequence
MHIHILGICG TFMGGLAVLA REAGHTVTGC DAGVYPPMST QLEAQGITLI EGYGAEQVDL 
KPDLFVIGNV VTRGNPLMEA ILDRGLPYVS GPQWLGEHVL AGKWVLAVAG THGKTTTSSM
LAWLLEDAGL NPGFLIGGVP LNFGVSARLT DSSFFVIEAD EYDTAFFDKR SKFVHYRLRT
AVLNNLEFDH ADIFPDLAAI ETQFHHLVRT VPGVGRIVTN GRSDALERVL ARGCWSEVER
FGVDGGWQAL PAEDGVPVDE RFAVYSHAGR VGEVAWQVQG DHNRMNALAA IAAARHVGVP
PAQAAESLAS FRNVKRRMEV RGSVDGVTVY DDFAHHPTAI DTTIAGLRAR IGRQNARILA
VLEPRSNTMK LGVMKSQLPA SLADADLVFG YGAPTGRDAL GWNLAEALAP LGDRARAFDD
LHLLVKAVVE AARPGDHVLV MSNGGFGGVH QKLLDALGSR P