Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0096 |
Symbol | |
ID | 4091857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 100432 |
End bp | 101718 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638013355 |
Product | type II secretion system protein E |
Protein accession | YP_619983 |
Protein GI | 107021656 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.188131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGGCTC ACATGCATTT CCCTTCCCCC GGGGCGCCGC TGCACACGCA GTCGCCGCCC GCGCATTCCG ACGCGCCAGC GGCCGCGCCC CATGCACTCG ATGCGGCGCA GCTCGACGAT GCCCCCGCCG TACGCCTGCT GACGGATACG CTACACGCGG CGCGTGTGCG CGACGCGTCG GACATCCACG TCGAGCCATT CGAGGCCGGC TGGCGCATCC GTCTGCGCAT CGACGGCGTG CTGCATGAAC ATGCGCGACC GCCGCTGCAC CTGCGCGATG CGCTCGTCAC GCGGATCAAG GTGCTCTCGC GCATGGACAT CGCCGAGCGG CGGCTTCCGC AGGACGGCCG GCTGCGCATC GCGATCGACG GCGGCACGCG CGGCGACTAC CGCGTCAGCT CGCTGCCCAC GCTGTTCGGC GAAAAGCTCG TGCTGCGGCG ACTCGAAACG CTGCCGCCCG ATCTCACGCT TGCCAACCTC GGCTTCGACG CGCGGCAGGC CGCCGCGATG GAGGCCGCGA TCCGCGCGCC GCATGGCCTC GTGCTCGTCA CGGGCCCGAC CGGCAGCGGC AAGACGCTGT CGCTCTACTG CGCGCTGCAG ATGCTCGATC GCGACGCGCA CAACGTCTGC ACGGTGGAAG ATCCCGCCGA AATCCAGCTC GACGGGATCA ACCAGGTGGG AGTCGCCGAC AAGGCGGGGC TCACGTTCGC GACGGCGCTG CGCGCGCTGT TGCGGCAGGA CCCGGACGTC ATCATGGTCG GCGAGATTCG CGATGCGGAA ACGGCCGATG TCGCGATCAA GGCCGCGCAG ACCGGTCATC TCGTGCTGTC GACCCTGCAC ACGAACGACG CGCCGGCGGC CGTCGCGCGG CTGCTCGACA TCGGCGTCGC GCCATACAAC CTCGCGGCCG CGCTGCACCT CGTCACCGCG CAGCGTCTCG TCCGGCGCCT GTGCGTCGCG TGCCGCGTGC ATTCGGACGC ATCGGCGCAC GCGCTGCGGG AAGCCGGCTG CGACCCGGCG GCGCTGGCAG CCGGATGGCG GCCGTTCGTC GCGCGCGGCT GTTCCGCCTG TCACGGCATC GGCTATCGCG GCCGCATCGG CCTGCATCAG ACGATGCCGG TATCGCCCGG GCTGGCCGAG CGCATCGTCG CGCGGGCGAG CGTCGGCGAG CTCGCGCAAT GCGTGGCGGC CGAGGGCGTG CGCAGCCTGC GCGACGCGGC ATTCGCGCGC GTCCTGGACG GCACGACGAG CATCGCGGAA GCCGTCGCCG CCACACCTGC GGCATGA
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Protein sequence | MPAHMHFPSP GAPLHTQSPP AHSDAPAAAP HALDAAQLDD APAVRLLTDT LHAARVRDAS DIHVEPFEAG WRIRLRIDGV LHEHARPPLH LRDALVTRIK VLSRMDIAER RLPQDGRLRI AIDGGTRGDY RVSSLPTLFG EKLVLRRLET LPPDLTLANL GFDARQAAAM EAAIRAPHGL VLVTGPTGSG KTLSLYCALQ MLDRDAHNVC TVEDPAEIQL DGINQVGVAD KAGLTFATAL RALLRQDPDV IMVGEIRDAE TADVAIKAAQ TGHLVLSTLH TNDAPAAVAR LLDIGVAPYN LAAALHLVTA QRLVRRLCVA CRVHSDASAH ALREAGCDPA ALAAGWRPFV ARGCSACHGI GYRGRIGLHQ TMPVSPGLAE RIVARASVGE LAQCVAAEGV RSLRDAAFAR VLDGTTSIAE AVAATPAA
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