| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0079 |
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| Symbol | ddl |
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| ID | 4091840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 82678 |
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| End bp | 83619 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638013339 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_619967 |
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| Protein GI | 107021640 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.704637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGGA TCGATCCGAA ACGTTTCGGC AAGGTGGCGG TGTTGTTCGG CGGCGAATCC
GCCGAGCGCG AGGTGTCGCT CACCTCGGGC CGCCTCGTGC TGCAGGGCCT GCGTGACGCG
GGCGTCGACG CGCATCCGTT CGACCCGGCC GAGCGGCCGC TGTCGGCGCT GAAGGACGAA
GGTTTCGTGC GCGCGTTCAA CGCGCTGCAC GGCGGCTACG GCGAGAACGG CCAGATCCAG
GGCGCGCTCG ATTTCTACGG GATTCGCTAT ACGGGCAGCG GCGTGCTGGG CTCGGCGCTC
GGCCTCGACA AGTTCCGCAC CAAGCTCGTG TGGCAGCAGA CGGGCGTGCC GACGCCGCCG
TTCGAGACGG TGATGCGCGG CGACGACCTG GCCGCGCGCG CGACCGACAT CGTCGCGAAG
CTCGGCCTGC CGCTGTTCGT GAAGCCGGCG AGCGAAGGCT CGAGCGTCGC GGTGCTGAAG
GTGAAGACGG CCGACGCGCT GCCGGCCGCG CTCGCGGAAG CCGCGACGCA CGACAAGATC
GTGATCGTCG AGAAGAGCAT CGAAGGCGGC GGCGAATATA CCGCGTGCAT CGCCGGCGAT
CTCGACCTGC CGCTGATCAA GATCGTGCCG GCGGGCGAGT TCTACGACTA CCACGCGAAG
TACGTCGCCG ACGATACGCA GTACCTGATC CCGTGCGGCC TGCCGGCGGA ACAGGAAACG
GAACTGAAGC GCATCGCGCG CCGCGCGTTC GACGTGCTCG GCTGTACCGA CTGGGGCCGC
GCGGATTTCA TGCTCGACGC GGCCGGCAAT GCGTATTTCC TCGAAGTGAA CACGGCCCCC
GGGATGACCG ACCACTCGCT GCCGCCGAAG GCCGCGCGCG CGGTCGGCAT CGGCTATTCC
GAGCTGGTCG TGAAGGTGCT GTCGCTCACG CTCAACGACT GA
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| Protein sequence | MSGIDPKRFG KVAVLFGGES AEREVSLTSG RLVLQGLRDA GVDAHPFDPA ERPLSALKDE
GFVRAFNALH GGYGENGQIQ GALDFYGIRY TGSGVLGSAL GLDKFRTKLV WQQTGVPTPP
FETVMRGDDL AARATDIVAK LGLPLFVKPA SEGSSVAVLK VKTADALPAA LAEAATHDKI
VIVEKSIEGG GEYTACIAGD LDLPLIKIVP AGEFYDYHAK YVADDTQYLI PCGLPAEQET
ELKRIARRAF DVLGCTDWGR ADFMLDAAGN AYFLEVNTAP GMTDHSLPPK AARAVGIGYS
ELVVKVLSLT LND
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