| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0051 |
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| Symbol | |
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| ID | 4091921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 49270 |
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| End bp | 50151 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638013308 |
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| Product | RNA polymerase sigma factor SigJ |
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| Protein accession | YP_619940 |
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| Protein GI | 107021613 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.492217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAACC TCGACCCGGC CAGCCGCCGC GCCGAAGAAC AAGCCGACGC GGCGGCGAGC
TTCGATCCGC TGCGTCGCAC GCTGATCCGC GTCGCGTACC GGATGCTCGG TTCCGTCGCG
GATGCCGAGG ACATGGTGCA GGAGGCGTTC ATCCGCTGGA TGGACGTCGA CCGTACCGAG
ATACGCGTGC CCGAGGCGTT CCTGCGCCGC ATGGTGATGC GCATGTGCCT CGACCAGCTG
AAATCCGCGC GGCACCAGCG CGAGACCTAT ATCGGCCCGT GGCTGCCCGA GCCGGTCGTC
GAGGAAGACG AACCGGACGA CGTCACGCTG CCGCTGCTGC TCGCGCTCGA ACGGCTCTCG
CCGCTCGAAC GCGCGGCGTT CCTGCTGCAC GACGTGTTCG GCCTCGAATT CGACGAAGTC
GCCACGACGA TCCAGCGCGA CCCGGCCGCG TGCCGGCAGC TCGCCGCACG AGCCCGCACG
CACGTGCGCG ACGCGCGACC GCGTTTTCAT GTCGAGAAGC AGCGCGGGAT CGAACTGGCC
GAAGCGTTTT TCGCGGCGTC ACGCAGCGGC GACATGCGCG CACTCGGCGC GATGCTCGCC
GAGGACGTGA GCCTGCATTC CGACGGCGGC GGCAAGCGCA CGGCGGCCGG CAAGCCGGTA
TTCGGCTTCG AGCTTGTGAT GCGGGTGCAT GCGTACCTGG CCGAGCTGTT CGCGACGCAT
GCGTCGAAGC TCGTGCGGGC CGGGTTCATC AACGGGCTGC CGGGTTTCAT CACGCTCGAA
GCCGACGGCG AGCTGCAGAC GACTGCGCTC GAGATCGACG ACGGCAAGAT CGTCGCGATC
TATGTCGTGC GGAATCCTGA CAAATTGAAG CATCTGCATT GA
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| Protein sequence | MPNLDPASRR AEEQADAAAS FDPLRRTLIR VAYRMLGSVA DAEDMVQEAF IRWMDVDRTE
IRVPEAFLRR MVMRMCLDQL KSARHQRETY IGPWLPEPVV EEDEPDDVTL PLLLALERLS
PLERAAFLLH DVFGLEFDEV ATTIQRDPAA CRQLAARART HVRDARPRFH VEKQRGIELA
EAFFAASRSG DMRALGAMLA EDVSLHSDGG GKRTAAGKPV FGFELVMRVH AYLAELFATH
ASKLVRAGFI NGLPGFITLE ADGELQTTAL EIDDGKIVAI YVVRNPDKLK HLH
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