Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0041 |
Symbol | |
ID | 4091911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 37608 |
End bp | 38915 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638013298 |
Product | outer membrane protein (porin)-like |
Protein accession | YP_619930 |
Protein GI | 107021603 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.13166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCATTG CGCGTTCGGT GTTTTCACCG ATCCGATTCT TTCCTCCGGG AAAGCGCCGT GAAGGATTGC ACCCTCTACG ATGCTACGCG TCGGCCCTCT CGCTGTGGCC GGCAAGCGTC GGCATACATT ACGTACTGCC AACGACCGGA TTCCAATGCG GCAGCTCGGA GGAGACGATC TTGAAACGAA AAACCCTTGC CCTTTCCATC GCGGCGGCAG GCCTGTGCGC CGGCCACGCG CATGCGCAGT CGAGCGTGCA GCTCTACGGC CTGATGGACC TGAGCTTTCC GACCTACCGG ACCCACGCCG ACGCGAACGG CAAACACGTG ATCGGGATGG GCAACGAAGG CGAACCGTGG TTCAGCGGCA GCCGCTGGGG CCTGCGCGGC GCCGAAGACA TCGGCGGCGG CACGAAGATC ATCTTCCGCC TCGAAAGCGA ATTCGTGGTC GCGAACGGCC AGATGGAAGA CGAAGGCCAG ATCTTCGACC GCGACGCGTG GGTCGGCGTC GAGGACGAGC GCTTCGGCAA GCTGACGGCC GGCTTCCAGA ACACGATCGC GCGCGATGCG GCGACGATCT ACGGCGACGC GTACGGCTCC GCGAGACTGT CGACCGAGGA AGGCGGCTGG ACCAACTCGA ACAACTTCAA GCAGATGATC TTCTACGCGG CCGGCCCGAC CGGCACGCGC TACAACAACG GCGTCGCGTG GAAGAAGCTG TTCAGCAACG GCATCTTCGC GAGCGCCGGC TACCAGTTCA GCAACTCGAC GTCGTTTGCG ACCGGCTCCG CGTACCAGGC CGCGCTCGGC TACAACGGCG GGCCGTTCAA CGTGTCGGGC TTCTACAACC ACGTGAACCA CAACGGCTTC CGGAACCAGA CGTTCTCGGT CGGCGGCAAC TACACGTTCG ACATCGTGCG GCTGAATGCC GGCTACTTCC GCTACAACGG TGACCAGGGC CCGCTCGGCC AGCGTCACGA CGATTCGTGG ACGGTGTCGA TGAAGATCGC GCCGAAGGGC GCGCTCGACT ACGAGCTCGG CTACCAGCAG ATGCGCATCA AGAACGCCGC GAACAACGCG GACGGCTTCA CGCCGAACGC GAACCTCGGC GCGTTCAGCC TGACCAACGG CGTCGCCAAC GGCTTCAAGG AGACGATCTA CGGGTCGGTG TTCTACCACC TGAGCAAGCG CACCGAGGTG TACCTGGCCG GCGACTACAT GAAGCTGCAC GGCGGCTACA CGGTGTCGTC GACGTTCGGC GCGAAGAACC AGCTCGAACT GACGTCGGGC ATCCGCACGC GTTTCTGA
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Protein sequence | MIIARSVFSP IRFFPPGKRR EGLHPLRCYA SALSLWPASV GIHYVLPTTG FQCGSSEETI LKRKTLALSI AAAGLCAGHA HAQSSVQLYG LMDLSFPTYR THADANGKHV IGMGNEGEPW FSGSRWGLRG AEDIGGGTKI IFRLESEFVV ANGQMEDEGQ IFDRDAWVGV EDERFGKLTA GFQNTIARDA ATIYGDAYGS ARLSTEEGGW TNSNNFKQMI FYAAGPTGTR YNNGVAWKKL FSNGIFASAG YQFSNSTSFA TGSAYQAALG YNGGPFNVSG FYNHVNHNGF RNQTFSVGGN YTFDIVRLNA GYFRYNGDQG PLGQRHDDSW TVSMKIAPKG ALDYELGYQQ MRIKNAANNA DGFTPNANLG AFSLTNGVAN GFKETIYGSV FYHLSKRTEV YLAGDYMKLH GGYTVSSTFG AKNQLELTSG IRTRF
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