| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0009 |
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| Symbol | |
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| ID | 4091879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 10672 |
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| End bp | 12171 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638013266 |
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| Product | Type II secretion system gspE |
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| Protein accession | YP_619898 |
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| Protein GI | 107021571 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACG TGCTCGCGTC CTCCGCCCAC GACGGCGCGC CGGGCGAACG CCAGCCGCCG
TCGCCGCTCG CCGCGCGCCT GCTGCCGTAC GGCTTCGCGA AGAGCGGCCA GGTGCTGATC
GCGCATCAGC TCGACGACAC GCTCGAGGTA TGGATCAGCG AACGCACGAG CGACGCCGCG
CTCGCGGAGA TCGCGCGCAA CTTCGGCTCG ATCGCCGTGC ATCGCGTGCC GGCCGACGAG
CTCGCACAGG CGATCAACCA GGCCTACGCA CGCCAGGACG GCAGCGCCGC GCAGGTGGTC
GGCGAGGTCG AAGGCGAAGT CGACCTGTCG CGGCTGATGC AGGACATTCC CGAAGTCGAG
GATCTGCTCG AATCGGAAGA CGATGCGCCG ATCATCCGGA TGATCAACGC GCTGCTCACG
CAAGCGGCGC GCGAACAGGC ATCGGACATT CACATCGAGC CATTCGAGAA TGCGTCGGTC
GTGCGCTTTC GCGTCGACGG CACGCTGCGC GACGTCGTGC GCCCGAAGAA GGCGCTGCAC
GGCGCGCTGA TCTCGCGGAT CAAGATCATG GCGCAGCTCG ACATCGCGGA GAAGCGTCTG
CCGCAGGACG GCCGCATCAC GCTGCGCGTC GGCGGCCGGC CGGTCGACGT GCGGGTGTCG
ACGCTGCCGA CCGGGCACGG CGAGCGCGCG GTGCTGCGTC TGCTCGAAAA GGATGCGCAG
CGCCTGAACC TCGAAGCGCT CGGGATGGGC CGCGACACGC TCGTCCAGTT CGACAAGCTG
ATCGGCCGCC CGCACGGCAT CGTGCTCGTC ACCGGCCCGA CCGGTTCGGG CAAGACGACC
ACGCTGTACG CGTCGATGTC GCGGCTCGAA ACCGCGACGA CCAACATCAT GACCGTCGAG
GACCCGATCG AATACGACCT GTCCGGCATT GGCCAGACGC AGGTGAACGA GCGAATCGGG
ATGACCTTTG CCCGCGCGCT GCGCTCGATT CTGCGCCAGG ACCCGGACGT GATCATGATC
GGCGAAATCC GCGACCTCGA AACCGCGCAG ATCGCGGTGC AGGCGTCGCT GACGGGCCAC
CTCGTGCTCG CGACGCTGCA CACGAACGAC GCGGCGTCCG CCGTCACGCG CCTGACCGAC
ATGGGCGTCG AGCCGTACCT GCTCGCGTCG TCGCTGCTCG GCGTGCTCGC GCAGCGCCTG
GTGCGCCAGC TCTGCCCGGT CTGCAAGGAA GAGCGGCATG AGGACGGCCG TACCGTATGG
CATCCGGTCG GTTGCGCGAA GTGCGGACAT TCCGGTTATG CGGGCCGGCG CGGTGTGTAC
GAGCTGCTGG TGATCGACGA TTCGATCCGC TCGCTGATTC ACCGCAACGC GGCCGATGCT
GAAATTCTCG CCGCCGGCCG CGCGGAAGGC ATGCGCACGC TGCGCGACGA CGCCGAGCGC
TGGCTCGCGT CCGGCGCGAC GTCGCTCGAG GAAGTGCTGC GCGTGACGGG AGGCGCATAG
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| Protein sequence | MSDVLASSAH DGAPGERQPP SPLAARLLPY GFAKSGQVLI AHQLDDTLEV WISERTSDAA
LAEIARNFGS IAVHRVPADE LAQAINQAYA RQDGSAAQVV GEVEGEVDLS RLMQDIPEVE
DLLESEDDAP IIRMINALLT QAAREQASDI HIEPFENASV VRFRVDGTLR DVVRPKKALH
GALISRIKIM AQLDIAEKRL PQDGRITLRV GGRPVDVRVS TLPTGHGERA VLRLLEKDAQ
RLNLEALGMG RDTLVQFDKL IGRPHGIVLV TGPTGSGKTT TLYASMSRLE TATTNIMTVE
DPIEYDLSGI GQTQVNERIG MTFARALRSI LRQDPDVIMI GEIRDLETAQ IAVQASLTGH
LVLATLHTND AASAVTRLTD MGVEPYLLAS SLLGVLAQRL VRQLCPVCKE ERHEDGRTVW
HPVGCAKCGH SGYAGRRGVY ELLVIDDSIR SLIHRNAADA EILAAGRAEG MRTLRDDAER
WLASGATSLE EVLRVTGGA
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