| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3187 |
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| Symbol | |
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| ID | 4082404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3343577 |
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| End bp | 3344389 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638011572 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_618223 |
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| Protein GI | 103488662 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.186382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAC TTCCCGAAGT CGAAACCACC GTGCGCGGCC TTGTCCCCTT TCTCGAAGGA
CAACGGCTGG CCGCCGTCAC CACCTTCCGC CCCGACCTTC GCCGCCCCTT TCCCGTTGAC
CTCGCGCAGC GGCTGACGGG TGCGACCGTG ACCAGGCTTT CGCGCCGCGC CAAATATGGC
ATCGTCTCGA CCGACCGCGA CGATCATATG ATCTTTCACC TCGGCATGTC GGGACGCTGG
CGGACCGAGG GCGGCGAGCC CGGCAAGCAC GACCATCTGC TCCTCGAAAC CGGCGCGGGG
CACCGGCTCT TTCTCCACGA CCCGCGGCGC TTCGGCTCGA TCGATCTGGT CGCGGGCGAT
CCGCTGGCCA GCTTTGCGGC CTTCGTGACG CTCGGCCCCG AACCGCTGTC GGACGATTTC
GACGCGGCCT TGCTGGCACG GGCGTTCGCG GCGCGCCGGG CGCCGGTGAA GGCGATGCTG
CTCGACCAGA ATGTCGTCGC GGGGCTCGGC AACATCTATG TCTGCGAGGC GCTCAACATG
GCGCGCATTT CGCCGCTGAT GCCCGCCGCC GGTGTGCCCA AGGCCAAACT TGCCGCGCTC
GTGTCCGCGA TCAGGGCGGT GCTCACCGCC GCGATCGCTG CTGGCGGATC GACGCTGCGC
GATTTTTTGA GCCCCGATGG CGACCTTGGT TATTTCGCAA AGGACTGGCG CGTCTATGGC
CGCGAGGGCG AGGCTTGCGA ATGCGGCGGC GCGATCGTTC GCGTCGTGCA GTCGGGTCGC
TCGACCTTTT ACTGCCGCAA ATGCCAGCGA TGA
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| Protein sequence | MPELPEVETT VRGLVPFLEG QRLAAVTTFR PDLRRPFPVD LAQRLTGATV TRLSRRAKYG
IVSTDRDDHM IFHLGMSGRW RTEGGEPGKH DHLLLETGAG HRLFLHDPRR FGSIDLVAGD
PLASFAAFVT LGPEPLSDDF DAALLARAFA ARRAPVKAML LDQNVVAGLG NIYVCEALNM
ARISPLMPAA GVPKAKLAAL VSAIRAVLTA AIAAGGSTLR DFLSPDGDLG YFAKDWRVYG
REGEACECGG AIVRVVQSGR STFYCRKCQR
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