| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3173 |
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| Symbol | |
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| ID | 4082509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3329511 |
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| End bp | 3330578 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011558 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_618209 |
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| Protein GI | 103488648 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.364827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCGC CGTTCACAGT TGCAAGAATG TCATGCGTGG CCGGTGCCGC CTTTCGCATA
AAAGGCCGTC GTCGCTGCGC CATCTTCCAT GCTCGATTCA ATCTCGCAGG GCGCTGGAAT
CGGGTCATTT CGAATAAGCG CTGGACCAAT CGCCACGTCG GACGGCATAG ACGCGCCATG
ATGCTGCTCG CCCTTATCGG CCTGATCGCG ACGCCGCCGA CGGGGGGCGC CGCAGCCGAT
CGCCCGCGCG CCGAGCATCC TGTCACCCTT GCGTTTCGCG CGCGGCGACC GGCCCGGCGC
TACAGCGTCA CCGTTCCGAT CGGCAAGCCC CGGCCCGCGG TGCCGCTGCC GCGGATCGAG
GGACCCGACG ATAATCGCCT GCCGCTCGTG GTGATCGACG CGGGGCACGG CGGGCACGAC
CCGGGCGCGA TTTCGCCGCA CAATGGTCGG CGTGAAAAGG ACGTCACATT GGCGATCGCG
CGCGCGATCC GCGACGAACT CCTCGCCTCG CGCCGCGTCC GCGTCGCGCT CACCCGCGAC
GACGACCGCT TCCTTGTGCT CGAGGAACGC TATGGCATCG CACGGCGGCT GAAGGCCGAC
CTCTTCATTT CGGTCCACGC CGATGCTGCC GAGAACAGCG AGGCGCACGG CGCGTCGGTC
TATACCTTGT CCGAAGTCGC ATCCGACCGC GAGGCGGCAC GGCTTGCGGC GCGCGAGAAC
AAGGCGAATA TCATCAACGG CGTCGATCTG GGGGCGCATG GCGATGCCGT GTCGTCGATC
CTTATCGACC TGACCCAGCG CGAAACGATG AACGCTTCGG CCGAATTTGC CCGCCTGCTC
CAGCGCGAGG CGTCGGACGA GATGACATTC CGCACCACCG CGCACCGCTT TGCCTCCTTC
GTCGTGCTGA AGGCACCCGA TACGCCGTCC GTGCTGTTCG AGACGGGTTT TCTCTCGAAC
AAGGGTGACG CCGCATTTCT CGCCTCGGCG TCGGGGCGCA AAAAGGTGGC GCGCGGCGTG
CGCGAAGCGG TGCAGATCCA TTTCGCGCGG CGTCTTGCGG CCGAGTGA
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| Protein sequence | MGSPFTVARM SCVAGAAFRI KGRRRCAIFH ARFNLAGRWN RVISNKRWTN RHVGRHRRAM
MLLALIGLIA TPPTGGAAAD RPRAEHPVTL AFRARRPARR YSVTVPIGKP RPAVPLPRIE
GPDDNRLPLV VIDAGHGGHD PGAISPHNGR REKDVTLAIA RAIRDELLAS RRVRVALTRD
DDRFLVLEER YGIARRLKAD LFISVHADAA ENSEAHGASV YTLSEVASDR EAARLAAREN
KANIINGVDL GAHGDAVSSI LIDLTQRETM NASAEFARLL QREASDEMTF RTTAHRFASF
VVLKAPDTPS VLFETGFLSN KGDAAFLASA SGRKKVARGV REAVQIHFAR RLAAE
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