| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3171 |
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| Symbol | |
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| ID | 4082507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3324897 |
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| End bp | 3326300 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011556 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_618207 |
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| Protein GI | 103488646 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0504963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.228205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT TCCCGCCGCA ACCCGCGTCC GGCGCGCATG GCTTGCGCTC CCTTTTTCAT
ATCCTGCTCA CGCTGCTCGC GATGGTCGCC ATCGCGGTGC GCCCCGCGGC CGCCCAGTCG
ATCCTGCGCG ATGCCGAAAC CGAGGCGCTG TTTCAGGATA TGATGGACCC GCTGCTCGTC
GCCGCGGGAT TGCAGCCGGG ACAGGTGCGC GTCCACCTGC TCGGCGATCG CAGCATCAAC
GCCTTTGTCG CGGGCAGCCA GGACATCTAT GTCTTCAGCG GGCTGATCGA AGCCGCCGAC
AGCGCCGAAG AGGTGCAGGG CGTGCTCGCG CACGAACTGG GGCATGTGAT GGGCGGCCAC
GCCATCCGCA TCAACGATGG CGTGAGCGCC GCGACCAGCA TCTCGCTGCT CAGCCTGCTG
CTCGGCGCCG CGGCGATCGC GGCGGGCGGC GGCGAGGCGG GCATGGGCAT CATGATGGCG
GGGCAGCAGG CGGCGCTCGG CAAGTTCCTC GCCTTCAGCC GCGTCCAGGA ATCGACCGCT
GACGCCGCCG GCGCACAATA TCTGTCGAAG GCGGGGATCA GCGGGCGCGG CAGCCTGGCC
TTCTTCAAGA AGCTCCAGAA TCTGGAGTTC CGCTATGGCA TCAAGCAGGA CGACGACCAG
GCCTATGGCC GGACGCACCC GATGTCGGGC GACCGTATCC AGGCGCTGCG CGAAGTCTAT
GTCATCGACC CCGCATGGAA CAAGCCGGCT GACCCGGCGA TCGAAAAGCG GTTCCAGCGC
ATCAAGGCCA AATTGTTGGG CTATATGGCC GAGCCCGAAC GGACGCTGCG CAAATTTCCG
GAAAGCGACC GCAGTGTTCC GGCGCGCTAT GCGCGCGCCT ATGCCTGGCA CAAGAGCGCC
TATCCGCAAA AGGCGCTGGC CGAAGTCGAG GCGCTGCTCG AAGCCGACCC CGACGACCCC
TATTTCCTCG AACTCGAAGG GCAGATCCTG CTCGAATCGG GGCGCCCCGA CGAGGCGATC
CCCCCGCTGC GCCAGGCGGT GGCCAAATCG CGCTCGCAAC CCCTGATTGC CGCCACGCTG
GGCCATGCGC TGATCGCGAC CGAAGAGCCC GCCCACTATG CCGAGGCCGA AAAGGTCCTG
AAAACCGCGG TCGCGCTCGA CAACCAGAAT CCCTTTGCCT GGTATCAGCT TGGCATCGTC
TATGCCAACA AGGGCGATCA GGCCCGCGCC GCGCTCGCTT CGGCCGAACG CTATAGCCTC
GAGGGTAGAC AACCGGCGCT GGCGCTGCGT AATGCCGAAA TGGCGATGCA GGGCCTGCCG
CAGGGATCGC CCGACTGGAT TCGCGCACAG GATATTTCGC TGGTCGCTCG CGCCGAGGTG
GAACGCGAGC GTAAACGGCG TTAG
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| Protein sequence | MTAFPPQPAS GAHGLRSLFH ILLTLLAMVA IAVRPAAAQS ILRDAETEAL FQDMMDPLLV
AAGLQPGQVR VHLLGDRSIN AFVAGSQDIY VFSGLIEAAD SAEEVQGVLA HELGHVMGGH
AIRINDGVSA ATSISLLSLL LGAAAIAAGG GEAGMGIMMA GQQAALGKFL AFSRVQESTA
DAAGAQYLSK AGISGRGSLA FFKKLQNLEF RYGIKQDDDQ AYGRTHPMSG DRIQALREVY
VIDPAWNKPA DPAIEKRFQR IKAKLLGYMA EPERTLRKFP ESDRSVPARY ARAYAWHKSA
YPQKALAEVE ALLEADPDDP YFLELEGQIL LESGRPDEAI PPLRQAVAKS RSQPLIAATL
GHALIATEEP AHYAEAEKVL KTAVALDNQN PFAWYQLGIV YANKGDQARA ALASAERYSL
EGRQPALALR NAEMAMQGLP QGSPDWIRAQ DISLVARAEV ERERKRR
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