Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3166 |
Symbol | |
ID | 4082502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3315826 |
End bp | 3317445 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638011551 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_618202 |
Protein GI | 103488641 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAG CCTGTGACGC CCTGATTATC GGCGCCGGCC ACAACGGCCT CGTCTGCGCC TTCTATCTCG CGAGGGCGGG GTTGAAGGTG CGGATCGTCG AGGCGCGCGA CGTCGTCGGC GGCGCCGCGG TGACCGAGGA GTTCGCGCCG GGCTTCCGCA ACTCGGTCGC GAGCTACACG GTCAGCCTGC TCCAGCCAAA GGTGATCGCC GACATGCGCC TTGCCGATCA TGGCTATCGC GTGATCGAAC GCCCGATCAG CAATTTCCTG CCGCAGGAGG ATGGCGGCTA TTTGAAGCTC GGCGGCGGGC TTGAACGCAC GCAGGCCGAG TTCGCCAAGT TCAGTGCGCG CGATGCCGAG GTGCTGCCCG CCTATTATGA CGCACTCGAA AATGTCGCCG AACTGCTCCG CGACCTCGCA CTGCGCGTCC CGCCCAACGT CGGCGAGGGG CTGCGCACCT TGCTCGACGG CGCGCGGCAG GGGCGGCGCT TCGCAGGCCT CAGCCTCGAA CAGCAGCGCG ACGTGCTCGA CCTCTTCACC AAATCGGCGC GCACGATGCT CGACAGCTGG TTCGAAAGCG AAGCGGTCAA GGCCGCCTTC GGCTTCGATG CCGTGGTCGG CAACTACGCC AGCCCGGACA CGCCGGGCAG CGCCTATGTC CTTCTGCACC ACGTCTTTGG CGAGGTGAAC AGCAGGAAGG GCGCGTGGGG GCACAGCGTC GGCGGCATGG GCCGGATTAC CGAGATCATG GCGAAGGTTT GCCGCGATCA TGGCGTCGAG ATCAGCCTCG AAAGTCCGGT CGCGAAAGTG CTGGTTGACG GAGGCAAAGC CGTCGGGGTG AGGCTTGTAG GCGGCGAAGA AATCGCCGCG GCGCGCGTGA TCGCCAATGT CGGGCCGAAA CTGCTCTACG AACGGCTGAT GGACGCCGCC GATCTGCCCG CCGACTTCCA GCGGCGGATC AGCGGCTTCA AGGTCGGAAG CGGAACATTC CGCATGAATG TCGCGCTGTC CGAGCTTCCC CGTTTCACCT GCCTGCCCGA ACCCGGCGAG CACCACCAGT CGGGAATCAT CCTCGCCCCG ACGCTTGATT ATATGGACCG CGCCTTCCTC GATGCGAAAC AATATGGCTG GTCGAAGGCG CCGATCGTCG AAATGCTGAT CCCCTCGACC GTCGACGACA GCCTCGCGCC TGAAGGCTGT CACGTTGCGA GCCTCTTCTG CCAGCAATTC GCGCCTGAAT TGCCCGCCAA AGAAGACGGG ACTCTCCGCG ACTGGGACGA TGAGGAGGAA GCTGCCGCCG ACTGCATCCT CGACACCGTC GAAAAACACG CGCCGGGTTT CCGCGCGAGT ATCGTCGGCC AGACGCGGCT GTCGCCCAAG GGGCTCGAAC GCAAGTTCGG CCTCGTCGGC GGCGACATCA TGCACGGCAA TATGAGCCTT GACCAGCTCT GGGCCGCGCG CCCGGTGCTC GGTAATGGCG GCTATCGCGG GCCGGTGAAG GGGCTGTATA TGTGCGGCGC GGGCACGCAT CCGGGCGGCG GCGTCACCGG CGCGCCGGGG CATAATGCGG CTGCAGTGAT CCTACGCGAC CGGGGGCTCT TCGCGCCCCG CTGGCGCTGA
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Protein sequence | MTKACDALII GAGHNGLVCA FYLARAGLKV RIVEARDVVG GAAVTEEFAP GFRNSVASYT VSLLQPKVIA DMRLADHGYR VIERPISNFL PQEDGGYLKL GGGLERTQAE FAKFSARDAE VLPAYYDALE NVAELLRDLA LRVPPNVGEG LRTLLDGARQ GRRFAGLSLE QQRDVLDLFT KSARTMLDSW FESEAVKAAF GFDAVVGNYA SPDTPGSAYV LLHHVFGEVN SRKGAWGHSV GGMGRITEIM AKVCRDHGVE ISLESPVAKV LVDGGKAVGV RLVGGEEIAA ARVIANVGPK LLYERLMDAA DLPADFQRRI SGFKVGSGTF RMNVALSELP RFTCLPEPGE HHQSGIILAP TLDYMDRAFL DAKQYGWSKA PIVEMLIPST VDDSLAPEGC HVASLFCQQF APELPAKEDG TLRDWDDEEE AAADCILDTV EKHAPGFRAS IVGQTRLSPK GLERKFGLVG GDIMHGNMSL DQLWAARPVL GNGGYRGPVK GLYMCGAGTH PGGGVTGAPG HNAAAVILRD RGLFAPRWR
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