| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3161 |
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| Symbol | |
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| ID | 4082497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3309753 |
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| End bp | 3311939 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638011546 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_618197 |
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| Protein GI | 103488636 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGA GCGCGCCCCG CCTTGCCCGC AAGCTGTCGA TCATGCTTGC ATCCACCGCG
ATGATCATGG GTTATGGCCC GATGAGCACC GCCATCGCCG CCGAACCCGC CGCCGCCAAA
ACCGTCCCCG CAGGACAGAA CCCGCTGCTG CAACCCTGGA CCGGCCCCTA TCAGGGGGTG
CCGCCGTGGG ACAAGCTCGA CCCCGAACTT TTCCCCGACG CCTTTCAGAA GGCGATGGCC
GAGGTGAAGG CCGAAGTGCA GGCGGTGATC GACAACCCCG CCGAACCGAC GTTCGAAAAC
ACCCACGTCC CGATGATGCT CGCGGGCGAG ACGATGGAGC GCGTCTTTGC GATGTGGGGC
GTGCAGACGT CGAACAAATC GAACGATCGC GTCGAGGAAA TCGACGCCGA ATGGAGCCCG
AGGCTCACCA CCTTCTACAC CGAGCTGTTC CTCGATCCCA AACTCTTCGC GCGCTACAAG
GCGGTGTACG ACAAGCGCCA CACGAGCGGG CTCGACGCGC AGCAGATCCG CATCGTCGAG
CGCAGCCATG ACGAAATGGT GCGCGACGGC GCGAACCTGT CCCCGGCGGA CAAGGAAAAG
CTGGTCGCGA TGAACGCGAA GCTCGAAGGC CTCTTCTCGG CTTTCTCCTC AAAGCTGCTC
GGCGATGAAA AGCTCTACAC CTTCGTCACC GACAAGGCCG AGCTCGACGG GCTCGACCCG
GCTTTCGTCG CGTCGCTTGC CGCCGCGGCG GAGGCCAACG GCCATGCCGG TCACTGGGCG
ATCAAGAATA CGCGCTCGTC GGCGCAACCG GTGCTGCAGA ATGCGACCAA CCGCAAATTG
CGCGAAAAGG TCTGGCGCGC CTTCGTCGGC CGCGGCGACA ATGGTGACGC CAACGACACC
AATGCGACGA TCGCCGAAAT CCTGAAGCTG CGCCAGCAGC GCGCCGAACT GCTCGGTTTC
CCGACCCACG CGCATTACCG CATGGCCGAC ACGATGGCGA AGACGCCCGA CAATGCGATG
GGTCTGATGA TGAAGGTGTG GCCCGCCGCC GTCGCGCGCG TGAAGGAAGA GGTCGCCGAC
ATGCAGGCGA TCGCCGACGC CGAAGCCAGG GCGGGCAAGG GGCCGAAGAT CACCATCGAG
CCATGGGACT ATCGCTATTA TGCCGAAAAG GTCCGCAAGG CGAAATATGA CCTCGATGAA
AGCGAGGTGA AGCCCTATCT TCAGCTCGAC AAGCTGGTCG ACGGCATGTT CTGGGCCGCG
GGTCGGCTCT ATGACCTCGG CTTCCGCGAG AATACGGGGC AGATTCCGGT TTTCGATCCC
AAGGTGCGGA CCTTCGAGGT TTATAACCTC AAGACGAACG AGAATGTCGG CGTCTTCTAC
CTCGACAATT TCGCGCGCGA CGGAAAGCGG TCGGGCGCGT GGATGACGAC CTATCGCAGC
CAGCAGTCGC TCGGCGGCGA GCGCAACGTC CTTGCCTCGA ACAACAATAA TTTCACCGAA
GGCGCACAGG GCGAACCGAC GCTCATCAGC ATCGACGACG CCTCGACCTT GTTCCACGAG
TTCGGCCACG GCATCCATTA TCTGCTCCAG CAGGTCAAAT ATCCGGCGCT CGCCGGGGTG
CCGCGCGATT TCGTCGAATA TCCCAGCCAG GTGAACGAAA ACTGGCTGAT GACCCCCGAA
GTGCTGTCGA AATATGCGAC GCACTACCGG ACGGGCGAGC CGATGCCGCA GGTGCTGGTC
GACAAGATCC TCGCGAGCCA GAAGTTCAAC CAGGGGTTCG AGACGGTCGA ATATCTGGCG
AGCGCGATCG TCGACATGAA GCTGCACGAC CGCAAGACCC CGCCGACCGA CGTCGACAGG
TTCGAACGCG AGACGCTGGC CGAAATCGGA ATGCCAAAGG AAATCGTCAT GCGGCACCGC
CTGCCGCAGT TCGGCCACCT GTTCAGCTCG GACGCCTATT CGGCGGGCTA TTACTCCTAC
CTCTGGTCCG AAACGATGGA CGCCGACACC TGGGCGGCTT TCACCGAAGC CGGCGGCCCG
TGGGACCGCA GCGTTGCCGA CAGGTTCCGC ACCATTTTGC TCATGACCGG CAACGAGACC
GACCGCGCCG AGGCCTATCG CGCCTTCCGC GGCCGCGACC CCGACGTCAA GGCGCTGCTC
GAAAAGCGCG GTTTCCCGAC CGAATAA
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| Protein sequence | MPQSAPRLAR KLSIMLASTA MIMGYGPMST AIAAEPAAAK TVPAGQNPLL QPWTGPYQGV
PPWDKLDPEL FPDAFQKAMA EVKAEVQAVI DNPAEPTFEN THVPMMLAGE TMERVFAMWG
VQTSNKSNDR VEEIDAEWSP RLTTFYTELF LDPKLFARYK AVYDKRHTSG LDAQQIRIVE
RSHDEMVRDG ANLSPADKEK LVAMNAKLEG LFSAFSSKLL GDEKLYTFVT DKAELDGLDP
AFVASLAAAA EANGHAGHWA IKNTRSSAQP VLQNATNRKL REKVWRAFVG RGDNGDANDT
NATIAEILKL RQQRAELLGF PTHAHYRMAD TMAKTPDNAM GLMMKVWPAA VARVKEEVAD
MQAIADAEAR AGKGPKITIE PWDYRYYAEK VRKAKYDLDE SEVKPYLQLD KLVDGMFWAA
GRLYDLGFRE NTGQIPVFDP KVRTFEVYNL KTNENVGVFY LDNFARDGKR SGAWMTTYRS
QQSLGGERNV LASNNNNFTE GAQGEPTLIS IDDASTLFHE FGHGIHYLLQ QVKYPALAGV
PRDFVEYPSQ VNENWLMTPE VLSKYATHYR TGEPMPQVLV DKILASQKFN QGFETVEYLA
SAIVDMKLHD RKTPPTDVDR FERETLAEIG MPKEIVMRHR LPQFGHLFSS DAYSAGYYSY
LWSETMDADT WAAFTEAGGP WDRSVADRFR TILLMTGNET DRAEAYRAFR GRDPDVKALL
EKRGFPTE
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