| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3157 |
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| Symbol | |
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| ID | 4082493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3304899 |
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| End bp | 3305762 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011542 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_618193 |
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| Protein GI | 103488632 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCGA CGCTGCGTTC TGACGCCCCG GGTTCCGGCT TTCGCCGGAA CGCGCAGCTA
TTTTATGGAA AGGATGTCCG CATGAAACTT GATTCCACCG TATCCGCCGT CGTCACCGGC
GGCGCCTCGG GCCTTGGCGC CGCGACCGCG CGCGCGCTCG CGGCGAAGGG CGTGAAAGTC
GCGATCTTCG ACCTGCAGGA AGAAAAGGGC AAAGCCATCG CCGAAGAACT CGGCGGCATA
TTCTGCGAAT GCAACGTCAC CGATGACGCC AGCGTCGACG CCGCCTTTGA AAAGGCGCGC
GCGGCGATCG GGCAGGAACG CATCCTCGTC AATTGCGCGG GCACCGGCAA TGCGATCAAG
ACCGCGAGCC GCAGCAAGGA AGACGGCAGC ATCAAGCATT TCCCGCTCGA TGCCTTCAAC
TGGATCATCC AGATCAACCT CGTCGGCACC TTCCGCTGCA TCGCCAAGTC GGCGGCGGGA
ATGCTGACGC TCGATCCGAT GGCGGACGGC GAGCGCGGCG CGATCGTCAA CACCGCATCG
GTCGCGGCCG AGGACGGCCA GATCGGTCAG GCGGCTTACT CCGCGTCGAA GGGCGGCGTT
GTCGGCATGA CGCTCCCCAT CGCGCGCGAC CTCGCGTCGG AGAATATCCG CGTCAACACC
ATCCTTCCGG GCATCTTCGA CACCCCGCTC CTCGCGGGCG CGCCGCAGAA TGTCCGCGAT
GCGCTCGGCG CCTCGGTGCT CAATCCGAAG CGGCTGGGCG TGCCCGATGA ATATGCCCAT
CTTGCGCTGT GCATGATCGA AAATGGCTAT TTCAACGGCG AGGACGTCCG CCTCGACGGC
GGCATCCGCA TGGGTCCGCG CTGA
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| Protein sequence | MAPTLRSDAP GSGFRRNAQL FYGKDVRMKL DSTVSAVVTG GASGLGAATA RALAAKGVKV
AIFDLQEEKG KAIAEELGGI FCECNVTDDA SVDAAFEKAR AAIGQERILV NCAGTGNAIK
TASRSKEDGS IKHFPLDAFN WIIQINLVGT FRCIAKSAAG MLTLDPMADG ERGAIVNTAS
VAAEDGQIGQ AAYSASKGGV VGMTLPIARD LASENIRVNT ILPGIFDTPL LAGAPQNVRD
ALGASVLNPK RLGVPDEYAH LALCMIENGY FNGEDVRLDG GIRMGPR
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